RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 AEBP2Q6ZN18 517 aaPredicted RBP8.65□□□□□ -1.02
SNORA28-201ENST00000606769 CHIC1Q5VXU3 224 aa8.46□□□□□ -1.06
SNORA28-201ENST00000606769 PHF23Q9BUL5 403 aaPredicted RBP7.52□□□□□ -1.21
SNORA28-201ENST00000606769 SENP3Q9H4L4 574 aaPredicted RBP7.18□□□□□ -1.26
SNORA28-201ENST00000606769 PLPPR3Q6T4P5 718 aa6.83□□□□□ -1.32
SNORA28-201ENST00000606769 FOXD1Q16676 465 aa6.75□□□□□ -1.33
SNORA28-201ENST00000606769 PPP6R1Q9UPN7 881 aa6.61□□□□□ -1.35
SNORA28-201ENST00000606769 ADRA2BP18089 450 aa6.56□□□□□ -1.36
SNORA28-201ENST00000606769 PIAS4Q8N2W9 510 aaPredicted RBP6.31□□□□□ -1.4
SNORA28-201ENST00000606769 MSH5O43196 834 aa6.08□□□□□ -1.44
SNORA28-201ENST00000606769 KCNA4P22459 653 aa6.07□□□□□ -1.44
SNORA28-201ENST00000606769 PPP4R3CPQ6ZMV5 832 aa6.07□□□□□ -1.44
SNORA28-201ENST00000606769 MAPK8IP2Q13387 824 aaPredicted RBP5.96□□□□□ -1.46
SNORA28-201ENST00000606769 NPM3O75607 178 aaKnown RBP5.88□□□□□ -1.47
SNORA28-201ENST00000606769 CNKSR2Q8WXI2 1034 aa5.85□□□□□ -1.47
SNORA28-201ENST00000606769 SCAF1Q9H7N4 1312 aaKnown RBP5.84□□□□□ -1.47
SNORA28-201ENST00000606769 NCBP3Q53F19 620 aaKnown RBP5.84□□□□□ -1.47
SNORA28-201ENST00000606769 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
SNORA28-201ENST00000606769 DMRT2Q9Y5R5 561 aa5.79□□□□□ -1.48
SNORA28-201ENST00000606769 HOXD11P31277 338 aaPredicted RBP5.73□□□□□ -1.49
SNORA28-201ENST00000606769 RNF216Q9NWF9 866 aaPredicted RBP5.73□□□□□ -1.49
SNORA28-201ENST00000606769 SLC4A1APQ9BWU0 796 aaKnown RBP5.72□□□□□ -1.49
SNORA28-201ENST00000606769 DNAJC5BQ9UF47 199 aa5.71□□□□□ -1.5
SNORA28-201ENST00000606769 EHMT2Q96KQ7 1210 aa5.67□□□□□ -1.5
SNORA28-201ENST00000606769 ZBTB22O15209 634 aa5.65□□□□□ -1.5
SNORA28-201ENST00000606769 CSRNP3Q8WYN3 585 aa5.63□□□□□ -1.51
SNORA28-201ENST00000606769 SLC4A2P04920 1241 aa5.57□□□□□ -1.52
SNORA28-201ENST00000606769 FOXD4L1Q9NU39 408 aa5.5□□□□□ -1.53
SNORA28-201ENST00000606769 DCAF8L1A6NGE4 600 aa5.44□□□□□ -1.54
SNORA28-201ENST00000606769 U3KPZ7 1027 aaPredicted RBP5.38□□□□□ -1.55
SNORA28-201ENST00000606769 MYCNP04198 464 aaPredicted RBP5.36□□□□□ -1.55
SNORA28-201ENST00000606769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.36□□□□□ -1.55
SNORA28-201ENST00000606769 ATF5Q9Y2D1 282 aaPredicted RBP5.34□□□□□ -1.55
SNORA28-201ENST00000606769 RNF39Q9H2S5 420 aa5.29□□□□□ -1.56
SNORA28-201ENST00000606769 ATXN8OSP0DMR3 200 aa5.28□□□□□ -1.56
SNORA28-201ENST00000606769 SAMD1Q6SPF0 538 aaPredicted RBP5.22□□□□□ -1.57
SNORA28-201ENST00000606769 SPINK5Q9NQ38 1064 aaPredicted RBP5.21□□□□□ -1.58
SNORA28-201ENST00000606769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.2□□□□□ -1.58
SNORA28-201ENST00000606769 HNRNPUL2Q1KMD3 747 aaKnown RBP5.2□□□□□ -1.58
SNORA28-201ENST00000606769 C1QBPQ07021 282 aaKnown RBP5.18□□□□□ -1.58
SNORA28-201ENST00000606769 ZNF219Q9P2Y4 722 aaPredicted RBP5.14□□□□□ -1.59
SNORA28-201ENST00000606769 TRHP20396 242 aaPredicted RBP5.1□□□□□ -1.59
SNORA28-201ENST00000606769 MKRN4PQ13434 485 aaPredicted RBP5.1□□□□□ -1.59
SNORA28-201ENST00000606769 CAPN15O75808 1086 aa5.09□□□□□ -1.59
SNORA28-201ENST00000606769 APLP2Q06481 763 aa5.08□□□□□ -1.6
SNORA28-201ENST00000606769 DSG3P32926 999 aa5.07□□□□□ -1.6
SNORA28-201ENST00000606769 ABCB7O75027 752 aa5.06□□□□□ -1.6
SNORA28-201ENST00000606769 POLA2Q14181 598 aa5.06□□□□□ -1.6
SNORA28-201ENST00000606769 CACNB1Q02641 598 aaPredicted RBP5.02□□□□□ -1.61
SNORA28-201ENST00000606769 FKBP8Q14318 412 aa5.02□□□□□ -1.61
SNORA28-201ENST00000606769 PROM2Q8N271 834 aa4.95□□□□□ -1.62
SNORA28-201ENST00000606769 SPDYE4A6NLX3 237 aa4.92□□□□□ -1.62
SNORA28-201ENST00000606769 FBLN2P98095 1184 aa4.92□□□□□ -1.62
SNORA28-201ENST00000606769 OSCARQ8IYS5 282 aa4.91□□□□□ -1.62
SNORA28-201ENST00000606769 ZBTB12Q9Y330 459 aaPredicted RBP4.9□□□□□ -1.63
SNORA28-201ENST00000606769 SSUH2Q9Y2M2 353 aa4.88□□□□□ -1.63
SNORA28-201ENST00000606769 SPDYE2BA6NHP3 402 aa4.83□□□□□ -1.64
SNORA28-201ENST00000606769 SPDYE6P0CI01 402 aa4.83□□□□□ -1.64
SNORA28-201ENST00000606769 SPDYE2Q495Y8 402 aa4.83□□□□□ -1.64
SNORA28-201ENST00000606769 ZNF692Q9BU19 519 aaPredicted RBP4.82□□□□□ -1.64
SNORA28-201ENST00000606769 PABPN1Q86U42 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNORA28-201ENST00000606769 RTN4Q9NQC3 1192 aaKnown RBP4.76□□□□□ -1.65
SNORA28-201ENST00000606769 VASPP50552 380 aaPredicted RBP4.75□□□□□ -1.65
SNORA28-201ENST00000606769 IFNLR1Q8IU57 520 aaPredicted RBP4.74□□□□□ -1.65
SNORA28-201ENST00000606769 FBXO3Q9UK99 471 aa4.73□□□□□ -1.65
SNORA28-201ENST00000606769 REM2Q8IYK8 340 aaPredicted RBP4.72□□□□□ -1.65
SNORA28-201ENST00000606769 AKT1S1Q96B36 256 aa4.72□□□□□ -1.65
SNORA28-201ENST00000606769 RBM42Q9BTD8 480 aaKnown RBP4.71□□□□□ -1.66
SNORA28-201ENST00000606769 PITPNM1O00562 1244 aa4.67□□□□□ -1.66
SNORA28-201ENST00000606769 AMER1Q5JTC6 1135 aaPredicted RBP4.67□□□□□ -1.66
SNORA28-201ENST00000606769 STAG3Q9UJ98 1225 aa4.67□□□□□ -1.66
SNORA28-201ENST00000606769 MNX1P50219 401 aaPredicted RBP4.66□□□□□ -1.66
SNORA28-201ENST00000606769 CREBZFQ9NS37 354 aa4.65□□□□□ -1.67
SNORA28-201ENST00000606769 SPDYE1Q8NFV5 336 aaPredicted RBP4.64□□□□□ -1.67
SNORA28-201ENST00000606769 PKD2Q13563 968 aa4.63□□□□□ -1.67
SNORA28-201ENST00000606769 MIER1Q8N108 512 aa4.62□□□□□ -1.67
SNORA28-201ENST00000606769 CLEC11AQ9Y240 323 aa4.62□□□□□ -1.67
SNORA28-201ENST00000606769 PLCD3Q8N3E9 789 aa4.6□□□□□ -1.67
SNORA28-201ENST00000606769 PRR29P0C7W0 189 aa4.59□□□□□ -1.67
SNORA28-201ENST00000606769 NUBP1P53384 320 aa4.59□□□□□ -1.67
SNORA28-201ENST00000606769 SPOCK2Q92563 424 aa4.59□□□□□ -1.67
SNORA28-201ENST00000606769 FXR2P51116 673 aaKnown RBP eCLIP4.58□□□□□ -1.68
SNORA28-201ENST00000606769 CHADLQ6NUI6 762 aa4.58□□□□□ -1.68
SNORA28-201ENST00000606769 KLHL34Q8N239 644 aa4.57□□□□□ -1.68
SNORA28-201ENST00000606769 CHRDL2Q6WN34 429 aa4.55□□□□□ -1.68
SNORA28-201ENST00000606769 PIP4P2Q8N4L2 257 aa4.55□□□□□ -1.68
SNORA28-201ENST00000606769 RASEFQ8IZ41 740 aa4.54□□□□□ -1.68
SNORA28-201ENST00000606769 RNF25Q96BH1 459 aaPredicted RBP4.52□□□□□ -1.69
SNORA28-201ENST00000606769 FARP1Q9Y4F1 1045 aaPredicted RBP4.52□□□□□ -1.69
SNORA28-201ENST00000606769 RGL2O15211 777 aa4.51□□□□□ -1.69
SNORA28-201ENST00000606769 PRKAR2AP13861 404 aaKnown RBP4.51□□□□□ -1.69
SNORA28-201ENST00000606769 ZBTB47Q9UFB7 747 aaPredicted RBP4.5□□□□□ -1.69
SNORA28-201ENST00000606769 ECM2O94769 699 aaPredicted RBP4.49□□□□□ -1.69
SNORA28-201ENST00000606769 NPM1P06748 294 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNORA28-201ENST00000606769 PLEKHG5O94827 1062 aa4.48□□□□□ -1.69
SNORA28-201ENST00000606769 CIZ1Q9ULV3 898 aaPredicted RBP4.48□□□□□ -1.69
SNORA28-201ENST00000606769 DCAF8Q5TAQ9 597 aa4.46□□□□□ -1.7
SNORA28-201ENST00000606769 POTEHQ6S545 545 aa4.46□□□□□ -1.7
SNORA28-201ENST00000606769 CHRM1P11229 460 aaPredicted RBP4.45□□□□□ -1.7
SNORA28-201ENST00000606769 GSE1Q14687 1217 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms