RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 AEBP2Q6ZN18 517 aaPredicted RBP8.5□□□□□ -1.05
CUL3-204ENST00000409777 CHIC1Q5VXU3 224 aa8.18□□□□□ -1.1
CUL3-204ENST00000409777 SENP3Q9H4L4 574 aaPredicted RBP7.45□□□□□ -1.22
CUL3-204ENST00000409777 PHF23Q9BUL5 403 aaPredicted RBP7.21□□□□□ -1.25
CUL3-204ENST00000409777 FOXD1Q16676 465 aa6.81□□□□□ -1.32
CUL3-204ENST00000409777 MSH5O43196 834 aa6.58□□□□□ -1.36
CUL3-204ENST00000409777 PLPPR3Q6T4P5 718 aa6.52□□□□□ -1.37
CUL3-204ENST00000409777 NISCHQ9Y2I1 1504 aa6.47□□□□□ -1.37
CUL3-204ENST00000409777 POTEDQ86YR6 584 aa6.35□□□□□ -1.39
CUL3-204ENST00000409777 PIAS4Q8N2W9 510 aaPredicted RBP6.31□□□□□ -1.4
CUL3-204ENST00000409777 PPP6R1Q9UPN7 881 aa6.21□□□□□ -1.41
CUL3-204ENST00000409777 ADRA2BP18089 450 aa6.18□□□□□ -1.42
CUL3-204ENST00000409777 SCAF1Q9H7N4 1312 aaKnown RBP5.93□□□□□ -1.46
CUL3-204ENST00000409777 DMRT2Q9Y5R5 561 aa5.9□□□□□ -1.46
CUL3-204ENST00000409777 EHMT2Q96KQ7 1210 aa5.87□□□□□ -1.47
CUL3-204ENST00000409777 DNAJC5BQ9UF47 199 aa5.78□□□□□ -1.48
CUL3-204ENST00000409777 KCNA4P22459 653 aa5.77□□□□□ -1.49
CUL3-204ENST00000409777 HOXD11P31277 338 aaPredicted RBP5.7□□□□□ -1.5
CUL3-204ENST00000409777 PPP4R3CPQ6ZMV5 832 aa5.68□□□□□ -1.5
CUL3-204ENST00000409777 MAPK8IP2Q13387 824 aaPredicted RBP5.65□□□□□ -1.5
CUL3-204ENST00000409777 CNKSR2Q8WXI2 1034 aa5.64□□□□□ -1.51
CUL3-204ENST00000409777 RNF216Q9NWF9 866 aaPredicted RBP5.63□□□□□ -1.51
CUL3-204ENST00000409777 SLC24A1O60721 1099 aa5.63□□□□□ -1.51
CUL3-204ENST00000409777 NCBP3Q53F19 620 aaKnown RBP5.61□□□□□ -1.51
CUL3-204ENST00000409777 CCDC180Q9P1Z9 1646 aa5.58□□□□□ -1.52
CUL3-204ENST00000409777 SLC4A1APQ9BWU0 796 aaKnown RBP5.55□□□□□ -1.52
CUL3-204ENST00000409777 RNF39Q9H2S5 420 aa5.54□□□□□ -1.52
CUL3-204ENST00000409777 ZCCHC6Q5VYS8 1495 aaKnown RBP5.53□□□□□ -1.52
CUL3-204ENST00000409777 C1QBPQ07021 282 aaKnown RBP5.53□□□□□ -1.52
CUL3-204ENST00000409777 CSRNP3Q8WYN3 585 aa5.52□□□□□ -1.53
CUL3-204ENST00000409777 NPM3O75607 178 aaKnown RBP5.52□□□□□ -1.53
CUL3-204ENST00000409777 CACNB1Q02641 598 aaPredicted RBP5.49□□□□□ -1.53
CUL3-204ENST00000409777 DCAF1Q9Y4B6 1507 aa5.43□□□□□ -1.54
CUL3-204ENST00000409777 RTN4Q9NQC3 1192 aaKnown RBP5.42□□□□□ -1.54
CUL3-204ENST00000409777 DNAJC5Q9H3Z4 198 aa5.37□□□□□ -1.55
CUL3-204ENST00000409777 MYO15BQ96JP2 1530 aa5.37□□□□□ -1.55
CUL3-204ENST00000409777 ZBTB22O15209 634 aa5.35□□□□□ -1.55
CUL3-204ENST00000409777 DCAF8L1A6NGE4 600 aa5.34□□□□□ -1.55
CUL3-204ENST00000409777 HRCP23327 699 aa5.32□□□□□ -1.56
CUL3-204ENST00000409777 SHROOM4Q9ULL8 1493 aa5.29□□□□□ -1.56
CUL3-204ENST00000409777 FOXD4L1Q9NU39 408 aa5.29□□□□□ -1.56
CUL3-204ENST00000409777 APLP2Q06481 763 aa5.28□□□□□ -1.56
CUL3-204ENST00000409777 ABCC9O60706 1549 aa5.26□□□□□ -1.57
CUL3-204ENST00000409777 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.25□□□□□ -1.572e-6■■□□□ 12.1
CUL3-204ENST00000409777 AMER1Q5JTC6 1135 aaPredicted RBP5.22□□□□□ -1.57
CUL3-204ENST00000409777 SUPT5HO00267 1087 aaKnown RBP5.21□□□□□ -1.58
CUL3-204ENST00000409777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.19□□□□□ -1.58
CUL3-204ENST00000409777 HNRNPUL2Q1KMD3 747 aaKnown RBP5.19□□□□□ -1.58
CUL3-204ENST00000409777 SLC4A2P04920 1241 aa5.17□□□□□ -1.58
CUL3-204ENST00000409777 ATXN8OSP0DMR3 200 aa5.17□□□□□ -1.58
CUL3-204ENST00000409777 U3KPZ7 1027 aaPredicted RBP5.16□□□□□ -1.58
CUL3-204ENST00000409777 RB1CC1Q8TDY2 1594 aa5.14□□□□□ -1.59
CUL3-204ENST00000409777 EIF4G1Q04637 1599 aaKnown RBP5.13□□□□□ -1.59
CUL3-204ENST00000409777 DSG3P32926 999 aa5.12□□□□□ -1.59
CUL3-204ENST00000409777 MYCNP04198 464 aaPredicted RBP5.11□□□□□ -1.59
CUL3-204ENST00000409777 RSF1Q96T23 1441 aaPredicted RBP5.11□□□□□ -1.59
CUL3-204ENST00000409777 SAMD1Q6SPF0 538 aaPredicted RBP5.1□□□□□ -1.59
CUL3-204ENST00000409777 PCGF6Q9BYE7 350 aa5.1□□□□□ -1.59
CUL3-204ENST00000409777 ZNF219Q9P2Y4 722 aaPredicted RBP5.1□□□□□ -1.59
CUL3-204ENST00000409777 TRIM26Q12899 539 aaPredicted RBP5.09□□□□□ -1.59
CUL3-204ENST00000409777 PPARGC1BQ86YN6 1023 aaKnown RBP5.07□□□□□ -1.6
CUL3-204ENST00000409777 ZEB1P37275 1124 aaPredicted RBP5.05□□□□□ -1.6
CUL3-204ENST00000409777 NACADO15069 1562 aa5.04□□□□□ -1.6
CUL3-204ENST00000409777 BAZ1AQ9NRL2 1556 aaPredicted RBP5.04□□□□□ -1.6
CUL3-204ENST00000409777 PRKCSHP14314 528 aaPredicted RBP5.04□□□□□ -1.6
CUL3-204ENST00000409777 SCRIBQ14160 1630 aa5.04□□□□□ -1.6
CUL3-204ENST00000409777 LOC105371045A0A1W2PR82 267 aa5.03□□□□□ -1.6
CUL3-204ENST00000409777 PELP1Q8IZL8 1130 aaKnown RBP5.03□□□□□ -1.6
CUL3-204ENST00000409777 CAPN15O75808 1086 aa5.01□□□□□ -1.61
CUL3-204ENST00000409777 RBM42Q9BTD8 480 aaKnown RBP5□□□□□ -1.61
CUL3-204ENST00000409777 WRNQ14191 1432 aaPredicted RBP eCLIP4.99□□□□□ -1.61
CUL3-204ENST00000409777 MROH2BQ7Z745 1585 aa4.99□□□□□ -1.61
CUL3-204ENST00000409777 SPINK5Q9NQ38 1064 aaPredicted RBP4.99□□□□□ -1.61
CUL3-204ENST00000409777 WIZO95785 1651 aa4.98□□□□□ -1.61
CUL3-204ENST00000409777 POTEHQ6S545 545 aa4.96□□□□□ -1.62
CUL3-204ENST00000409777 TOP2AP11388 1531 aaKnown RBP4.96□□□□□ -1.62
CUL3-204ENST00000409777 CECR2Q9BXF3 1484 aa4.96□□□□□ -1.62
CUL3-204ENST00000409777 ZBTB12Q9Y330 459 aaPredicted RBP4.96□□□□□ -1.62
CUL3-204ENST00000409777 FKBP8Q14318 412 aa4.94□□□□□ -1.62
CUL3-204ENST00000409777 SMARCA2P51531 1590 aa4.93□□□□□ -1.62
CUL3-204ENST00000409777 UNC13AQ9UPW8 1703 aa4.92□□□□□ -1.62
CUL3-204ENST00000409777 SMARCA4P51532 1647 aa4.92□□□□□ -1.62
CUL3-204ENST00000409777 ATF5Q9Y2D1 282 aaPredicted RBP4.92□□□□□ -1.62
CUL3-204ENST00000409777 PEG3Q9GZU2 1588 aa4.91□□□□□ -1.62
CUL3-204ENST00000409777 TRIM41Q8WV44 630 aa4.91□□□□□ -1.62
CUL3-204ENST00000409777 DCAF8L2P0C7V8 631 aa4.9□□□□□ -1.63
CUL3-204ENST00000409777 EEA1Q15075 1411 aa4.9□□□□□ -1.63
CUL3-204ENST00000409777 KIF21BO75037 1637 aa4.89□□□□□ -1.63
CUL3-204ENST00000409777 TNIKQ9UKE5 1360 aa4.87□□□□□ -1.63
CUL3-204ENST00000409777 CCDC88BA6NC98 1476 aa4.86□□□□□ -1.63
CUL3-204ENST00000409777 TRHP20396 242 aaPredicted RBP4.86□□□□□ -1.63
CUL3-204ENST00000409777 PLCB2Q00722 1185 aa4.86□□□□□ -1.63
CUL3-204ENST00000409777 AKT1S1Q96B36 256 aa4.86□□□□□ -1.63
CUL3-204ENST00000409777 TAOK2Q9UL54 1235 aa4.86□□□□□ -1.63
CUL3-204ENST00000409777 ACIN1Q9UKV3 1341 aaKnown RBP4.86□□□□□ -1.63
CUL3-204ENST00000409777 ABCC8Q09428 1581 aa4.85□□□□□ -1.63
CUL3-204ENST00000409777 CEP162Q5TB80 1403 aa4.85□□□□□ -1.63
CUL3-204ENST00000409777 BAZ1BQ9UIG0 1483 aaKnown RBP4.83□□□□□ -1.64
CUL3-204ENST00000409777 MYT1Q01538 1121 aa4.82□□□□□ -1.64
CUL3-204ENST00000409777 GOLGA3Q08378 1498 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms