RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 AEBP2Q6ZN18 517 aaPredicted RBP8.06□□□□□ -1.12
SCARNA21.1-201ENST00000515996 POTEDQ86YR6 584 aa7.78□□□□□ -1.16
SCARNA21.1-201ENST00000515996 CHIC1Q5VXU3 224 aa7.48□□□□□ -1.21
SCARNA21.1-201ENST00000515996 SENP3Q9H4L4 574 aaPredicted RBP6.98□□□□□ -1.29
SCARNA21.1-201ENST00000515996 PHF23Q9BUL5 403 aaPredicted RBP6.76□□□□□ -1.33
SCARNA21.1-201ENST00000515996 FOXD1Q16676 465 aa6.61□□□□□ -1.35
SCARNA21.1-201ENST00000515996 MSH5O43196 834 aa6.49□□□□□ -1.37
SCARNA21.1-201ENST00000515996 CACNB1Q02641 598 aaPredicted RBP6.1□□□□□ -1.43
SCARNA21.1-201ENST00000515996 PIAS4Q8N2W9 510 aaPredicted RBP5.99□□□□□ -1.45
SCARNA21.1-201ENST00000515996 POTEHQ6S545 545 aa5.93□□□□□ -1.46
SCARNA21.1-201ENST00000515996 PPP6R1Q9UPN7 881 aa5.55□□□□□ -1.52
SCARNA21.1-201ENST00000515996 ADRA2BP18089 450 aa5.49□□□□□ -1.53
SCARNA21.1-201ENST00000515996 RNF39Q9H2S5 420 aa5.48□□□□□ -1.53
SCARNA21.1-201ENST00000515996 DMRT2Q9Y5R5 561 aa5.41□□□□□ -1.54
SCARNA21.1-201ENST00000515996 C1QBPQ07021 282 aaKnown RBP5.33□□□□□ -1.56
SCARNA21.1-201ENST00000515996 MAPK8IP2Q13387 824 aaPredicted RBP5.29□□□□□ -1.56
SCARNA21.1-201ENST00000515996 PLSCR2Q9NRY7 297 aa5.27□□□□□ -1.57
SCARNA21.1-201ENST00000515996 DCAF8L1A6NGE4 600 aa5.25□□□□□ -1.57
SCARNA21.1-201ENST00000515996 SP7Q8TDD2 431 aaPredicted RBP5.17□□□□□ -1.58
SCARNA21.1-201ENST00000515996 PLPPR3Q6T4P5 718 aa5.06□□□□□ -1.6
SCARNA21.1-201ENST00000515996 SCAF1Q9H7N4 1312 aaKnown RBP4.97□□□□□ -1.61
SCARNA21.1-201ENST00000515996 CHRDL2Q6WN34 429 aa4.89□□□□□ -1.63
SCARNA21.1-201ENST00000515996 HOXD11P31277 338 aaPredicted RBP4.86□□□□□ -1.63
SCARNA21.1-201ENST00000515996 DSG3P32926 999 aa4.85□□□□□ -1.63
SCARNA21.1-201ENST00000515996 DNAJC5BQ9UF47 199 aa4.83□□□□□ -1.64
SCARNA21.1-201ENST00000515996 LHX8Q68G74 356 aa4.82□□□□□ -1.64
SCARNA21.1-201ENST00000515996 HAX1O00165 279 aa4.72□□□□□ -1.65
SCARNA21.1-201ENST00000515996 CAPN15O75808 1086 aa4.69□□□□□ -1.66
SCARNA21.1-201ENST00000515996 SPINK5Q9NQ38 1064 aaPredicted RBP4.67□□□□□ -1.66
SCARNA21.1-201ENST00000515996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCARNA21.1-201ENST00000515996 RBM42Q9BTD8 480 aaKnown RBP4.63□□□□□ -1.67
SCARNA21.1-201ENST00000515996 EVX2Q03828 476 aa4.62□□□□□ -1.67
SCARNA21.1-201ENST00000515996 POTEMA6NI47 508 aa4.61□□□□□ -1.67
SCARNA21.1-201ENST00000515996 RNF216Q9NWF9 866 aaPredicted RBP4.6□□□□□ -1.67
SCARNA21.1-201ENST00000515996 PIP4P2Q8N4L2 257 aa4.59□□□□□ -1.67
SCARNA21.1-201ENST00000515996 POTEGQ6S5H5 508 aa4.56□□□□□ -1.68
SCARNA21.1-201ENST00000515996 ABCB7O75027 752 aa4.53□□□□□ -1.68
SCARNA21.1-201ENST00000515996 PCDH10Q9P2E7 1040 aa4.52□□□□□ -1.69
SCARNA21.1-201ENST00000515996 U3KPZ7 1027 aaPredicted RBP4.47□□□□□ -1.69
SCARNA21.1-201ENST00000515996 GABBR2O75899 941 aa4.45□□□□□ -1.7
SCARNA21.1-201ENST00000515996 CNKSR2Q8WXI2 1034 aa4.42□□□□□ -1.7
SCARNA21.1-201ENST00000515996 TRHP20396 242 aaPredicted RBP4.41□□□□□ -1.7
SCARNA21.1-201ENST00000515996 FXR2P51116 673 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCARNA21.1-201ENST00000515996 POTEIP0CG38 1075 aa4.36□□□□□ -1.71
SCARNA21.1-201ENST00000515996 OTUD5Q96G74 571 aa4.35□□□□□ -1.71
SCARNA21.1-201ENST00000515996 ZNF219Q9P2Y4 722 aaPredicted RBP4.35□□□□□ -1.71
SCARNA21.1-201ENST00000515996 AKT1S1Q96B36 256 aa4.34□□□□□ -1.71
SCARNA21.1-201ENST00000515996 PPP4R3CPQ6ZMV5 832 aa4.33□□□□□ -1.72
SCARNA21.1-201ENST00000515996 REM2Q8IYK8 340 aaPredicted RBP4.32□□□□□ -1.72
SCARNA21.1-201ENST00000515996 PITPNM1O00562 1244 aa4.31□□□□□ -1.72
SCARNA21.1-201ENST00000515996 C19orf67A6NJJ6 358 aa4.3□□□□□ -1.72
SCARNA21.1-201ENST00000515996 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
SCARNA21.1-201ENST00000515996 APLP2Q06481 763 aa4.21□□□□□ -1.74
SCARNA21.1-201ENST00000515996 POTEB2H3BUK9 544 aa4.2□□□□□ -1.74
SCARNA21.1-201ENST00000515996 MMRN1Q13201 1228 aa4.19□□□□□ -1.74
SCARNA21.1-201ENST00000515996 PRKAR2AP13861 404 aaKnown RBP4.18□□□□□ -1.74
SCARNA21.1-201ENST00000515996 CDAN1Q8IWY9 1227 aa4.18□□□□□ -1.74
SCARNA21.1-201ENST00000515996 FAM163AQ96GL9 167 aaPredicted RBP4.15□□□□□ -1.75
SCARNA21.1-201ENST00000515996 DCBLD2Q96PD2 775 aa4.15□□□□□ -1.75
SCARNA21.1-201ENST00000515996 SPNS2Q8IVW8 549 aa4.1□□□□□ -1.75
SCARNA21.1-201ENST00000515996 POLA2Q14181 598 aa4.09□□□□□ -1.75
SCARNA21.1-201ENST00000515996 OSCARQ8IYS5 282 aa4.04□□□□□ -1.76
SCARNA21.1-201ENST00000515996 CLCN6P51797 869 aa4.03□□□□□ -1.76
SCARNA21.1-201ENST00000515996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.01□□□□□ -1.77
SCARNA21.1-201ENST00000515996 POTEJP0CG39 1038 aa4.01□□□□□ -1.77
SCARNA21.1-201ENST00000515996 HNRNPUL2Q1KMD3 747 aaKnown RBP4.01□□□□□ -1.77
SCARNA21.1-201ENST00000515996 CD44P16070 742 aaKnown RBP4□□□□□ -1.77
SCARNA21.1-201ENST00000515996 MAMSTRQ6ZN01 415 aa3.98□□□□□ -1.77
SCARNA21.1-201ENST00000515996 SAMD1Q6SPF0 538 aaPredicted RBP3.97□□□□□ -1.77
SCARNA21.1-201ENST00000515996 CHADLQ6NUI6 762 aa3.96□□□□□ -1.78
SCARNA21.1-201ENST00000515996 CLEC11AQ9Y240 323 aa3.94□□□□□ -1.78
SCARNA21.1-201ENST00000515996 SCUBE2Q9NQ36 999 aa3.93□□□□□ -1.78
SCARNA21.1-201ENST00000515996 ZBTB12Q9Y330 459 aaPredicted RBP3.93□□□□□ -1.78
SCARNA21.1-201ENST00000515996 GALR2O43603 387 aaPredicted RBP3.91□□□□□ -1.78
SCARNA21.1-201ENST00000515996 SLC4A2P04920 1241 aa3.91□□□□□ -1.78
SCARNA21.1-201ENST00000515996 PELP1Q8IZL8 1130 aaKnown RBP3.91□□□□□ -1.78
SCARNA21.1-201ENST00000515996 METRNQ9UJH8 293 aa3.9□□□□□ -1.79
SCARNA21.1-201ENST00000515996 NCBP3Q53F19 620 aaKnown RBP3.89□□□□□ -1.79
SCARNA21.1-201ENST00000515996 ZNF579Q8NAF0 562 aaKnown RBP3.89□□□□□ -1.79
SCARNA21.1-201ENST00000515996 SPDYE1Q8NFV5 336 aaPredicted RBP3.89□□□□□ -1.79
SCARNA21.1-201ENST00000515996 NPM3O75607 178 aaKnown RBP3.87□□□□□ -1.79
SCARNA21.1-201ENST00000515996 ST18O60284 1047 aa3.85□□□□□ -1.79
SCARNA21.1-201ENST00000515996 C7P10643 843 aa3.83□□□□□ -1.8
SCARNA21.1-201ENST00000515996 SLC39A7Q92504 469 aa3.81□□□□□ -1.8
SCARNA21.1-201ENST00000515996 ZRANB1Q9UGI0 708 aa3.8□□□□□ -1.8
SCARNA21.1-201ENST00000515996 FARP1Q9Y4F1 1045 aaPredicted RBP3.8□□□□□ -1.8
SCARNA21.1-201ENST00000515996 ASTLQ6HA08 431 aaPredicted RBP3.75□□□□□ -1.81
SCARNA21.1-201ENST00000515996 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
SCARNA21.1-201ENST00000515996 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
SCARNA21.1-201ENST00000515996 SPDYE2BA6NHP3 402 aa3.74□□□□□ -1.81
SCARNA21.1-201ENST00000515996 SPDYE6P0CI01 402 aa3.74□□□□□ -1.81
SCARNA21.1-201ENST00000515996 SPDYE2Q495Y8 402 aa3.74□□□□□ -1.81
SCARNA21.1-201ENST00000515996 TMEM121BQ9BXQ6 578 aaPredicted RBP3.74□□□□□ -1.81
SCARNA21.1-201ENST00000515996 ATMINO43313 823 aaPredicted RBP3.73□□□□□ -1.81
SCARNA21.1-201ENST00000515996 PRR29P0C7W0 189 aa3.73□□□□□ -1.81
SCARNA21.1-201ENST00000515996 MARVELD3Q96A59 401 aa3.73□□□□□ -1.81
SCARNA21.1-201ENST00000515996 RNF166Q96A37 237 aaPredicted RBP3.71□□□□□ -1.82
SCARNA21.1-201ENST00000515996 PHF12Q96QT6 1004 aa3.71□□□□□ -1.82
SCARNA21.1-201ENST00000515996 POTEFA5A3E0 1075 aa3.7□□□□□ -1.82
SCARNA21.1-201ENST00000515996 SLAIN1Q8ND83 568 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms