Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.55□□□□□ -0.08
U3KQE9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
U3KQE9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
U3KQE9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.55□□□□□ -0.08
U3KQE9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
U3KQE9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.55□□□□□ -0.08
U3KQE9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.55□□□□□ -0.08
U3KQE9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
U3KQE9 AL031598.1-201ENST00000561511 1773 ntBASIC14.55□□□□□ -0.08
U3KQE9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
U3KQE9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
U3KQE9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.54□□□□□ -0.08
U3KQE9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
U3KQE9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 AC131212.4-201ENST00000623606 975 ntBASIC14.54□□□□□ -0.08
U3KQE9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.54□□□□□ -0.08
U3KQE9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
U3KQE9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.54□□□□□ -0.08
U3KQE9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
U3KQE9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
U3KQE9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.54□□□□□ -0.08
U3KQE9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 AC004980.1-204ENST00000429707 299 ntBASIC14.53□□□□□ -0.08
U3KQE9 KSR1P1-201ENST00000446298 240 ntBASIC14.53□□□□□ -0.08
U3KQE9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.53□□□□□ -0.08
U3KQE9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.53□□□□□ -0.08
U3KQE9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.53□□□□□ -0.08
U3KQE9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.53□□□□□ -0.08
U3KQE9 AC083906.6-201ENST00000641366 219 ntBASIC14.53□□□□□ -0.08
U3KQE9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
U3KQE9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.53□□□□□ -0.08
U3KQE9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
U3KQE9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
U3KQE9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
U3KQE9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
U3KQE9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.52□□□□□ -0.08
U3KQE9 Z98044.1-201ENST00000632503 1764 ntBASIC14.52□□□□□ -0.08
U3KQE9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
U3KQE9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
U3KQE9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
U3KQE9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
U3KQE9 HTR7P1-201ENST00000538670 1336 ntBASIC14.52□□□□□ -0.08
U3KQE9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U3KQE9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
U3KQE9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
U3KQE9 AL353807.1-201ENST00000427475 662 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms