Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERGIC3Q9Y282 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERGIC3Q9Y282 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 SIRPAP1-201ENST00000448467 1770 ntBASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 AL139246.5-201ENST00000606645 996 ntBASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ERGIC3Q9Y282 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ERGIC3Q9Y282 PCDHA12-202ENST00000613593 2588 ntBASIC17.39■□□□□ 0.38
ERGIC3Q9Y282 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 AC011270.2-201ENST00000624293 2550 ntBASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ERGIC3Q9Y282 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 AL031432.3-201ENST00000607698 485 ntBASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 AC084018.2-201ENST00000613093 2607 ntBASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERGIC3Q9Y282 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERGIC3Q9Y282 FP475955.4-201ENST00000623131 1990 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms