Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 CRYGFP-201ENST00000418459 633 ntBASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 AP005242.2-201ENST00000580065 1175 ntBASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA4Q9UN74 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 FITM1-202ENST00000559294 800 ntBASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHA4Q9UN74 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 AL390955.1-201ENST00000428694 934 ntBASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA4Q9UN74 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA4Q9UN74 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 MIR1238-201ENST00000408483 83 ntBASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms