Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 AL121832.2-201ENST00000610979 668 ntBASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB16Q9NRJ7 AC079598.2-202ENST00000546624 1451 ntBASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB16Q9NRJ7 ZNF815P-204ENST00000434898 1737 ntBASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CROCCP5-201ENST00000436658 830 ntBASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 AL121906.2-201ENST00000621597 723 ntBASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms