Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC52A3Q9NQ40 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SLC52A3Q9NQ40 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 TSPY6P-201ENST00000448518 926 ntBASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 AC067852.2-201ENST00000590513 2313 ntBASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC52A3Q9NQ40 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AP000997.3-201ENST00000623333 2250 ntBASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AC097658.1-201ENST00000475555 843 ntBASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AC090192.1-201ENST00000517740 490 ntBASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 AC083880.1-201ENST00000608266 535 ntBASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 HLA-A-209ENST00000638375 975 ntBASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC52A3Q9NQ40 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 AL162741.1-201ENST00000565563 1558 ntBASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC52A3Q9NQ40 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms