Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 AC008622.2-201ENST00000617006 1229 ntBASIC22.23■■□□□ 1.15
SH2D4AQ9H788 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D4AQ9H788 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SH2D4AQ9H788 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AL031133.1-201ENST00000406807 723 ntBASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AC009947.2-201ENST00000444014 672 ntBASIC22.21■■□□□ 1.15
SH2D4AQ9H788 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AL441883.1-201ENST00000566170 1045 ntBASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D4AQ9H788 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SH2D4AQ9H788 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.2■■□□□ 1.14
SH2D4AQ9H788 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 AC112907.3-201ENST00000577781 2400 ntBASIC22.2■■□□□ 1.14
SH2D4AQ9H788 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.2■■□□□ 1.14
SH2D4AQ9H788 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms