Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 MIR4651-201ENST00000582622 73 ntBASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC38A1Q9H2H9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 AC128676.1-201ENST00000454392 318 ntBASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 Z85996.1-201ENST00000494644 937 ntBASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 CD99P1-205ENST00000527459 561 ntBASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 AC138932.1-201ENST00000534164 6830 ntBASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC38A1Q9H2H9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC38A1Q9H2H9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SLC38A1Q9H2H9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC38A1Q9H2H9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC38A1Q9H2H9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SLC38A1Q9H2H9 AL512353.2-201ENST00000448759 1962 ntBASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC38A1Q9H2H9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms