Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.632e-7■■■■□ 19.5
XRN2Q9H0D6 CLIP1-211ENST00000539080 560 ntTSL 422.53■■□□□ 1.25e-9■■■■□ 19.5
XRN2Q9H0D6 CARD10-205ENST00000437756 2140 ntTSL 1 (best)20.57■□□□□ 0.884e-7■■■■□ 19.5
XRN2Q9H0D6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.544e-7■■■■□ 19.5
XRN2Q9H0D6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.074e-7■■■■□ 19.5
XRN2Q9H0D6 CLIP1-219ENST00000620786 5913 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.555e-9■■■■□ 19.5
XRN2Q9H0D6 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC11.22□□□□□ -0.615e-9■■■■□ 19.5
XRN2Q9H0D6 CLIP1-209ENST00000537178 5229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.715e-9■■■■□ 19.5
XRN2Q9H0D6 CLIP1-202ENST00000358808 5880 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.795e-9■■■■□ 19.5
XRN2Q9H0D6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.96■□□□□ 0.632e-6■■■■□ 19.5
XRN2Q9H0D6 PUS1-204ENST00000456665 577 ntTSL 528.15■■■□□ 2.15e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-207ENST00000538037 631 ntTSL 526.72■■□□□ 1.875e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-211ENST00000544662 836 ntTSL 325.74■■□□□ 1.715e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.515e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-201ENST00000322060 1206 ntAPPRIS ALT2 TSL 522.78■■□□□ 1.245e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.17■□□□□ 0.185e-16■■■■□ 19.5
XRN2Q9H0D6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.055e-16■■■■□ 19.5
XRN2Q9H0D6 CBFA2T3-209ENST00000569443 469 ntTSL 514.61□□□□□ -0.072e-6■■■■□ 19.5
XRN2Q9H0D6 EIF5-211ENST00000559532 678 ntTSL 430.08■■■□□ 2.413e-11■■■■□ 19.5
XRN2Q9H0D6 DXO-208ENST00000478221 1132 ntTSL 1 (best)25.52■■□□□ 1.685e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-213ENST00000492946 1474 ntTSL 1 (best)24.45■■□□□ 1.55e-17■■■■□ 19.5
XRN2Q9H0D6 EIF5-209ENST00000559130 583 ntTSL 324.4■■□□□ 1.53e-11■■■■□ 19.5
XRN2Q9H0D6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.435e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-210ENST00000485557 1878 ntTSL 222.7■■□□□ 1.225e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-204ENST00000460058 737 ntTSL 222.03■■□□□ 1.125e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.085e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-211ENST00000487914 1016 ntTSL 521.42■■□□□ 1.025e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-206ENST00000474587 1115 ntTSL 520.9■□□□□ 0.945e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-209ENST00000480240 1346 ntTSL 520.32■□□□□ 0.845e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-212ENST00000491327 1395 ntTSL 519.65■□□□□ 0.745e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.735e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-215ENST00000498357 1625 ntTSL 1 (best)19.25■□□□□ 0.675e-17■■■■□ 19.5
XRN2Q9H0D6 DXO-205ENST00000473976 2025 ntTSL 1 (best)18.79■□□□□ 0.65e-17■■■■□ 19.5
XRN2Q9H0D6 SLC38A3-209ENST00000621714 992 ntTSL 517.65■□□□□ 0.424e-6■■■■□ 19.5
XRN2Q9H0D6 DXO-207ENST00000477826 2093 ntTSL 1 (best)17.23■□□□□ 0.355e-17■■■■□ 19.5
XRN2Q9H0D6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.273e-11■■■■□ 19.5
XRN2Q9H0D6 SLC38A3-204ENST00000445096 880 ntTSL 510.75□□□□□ -0.694e-6■■■■□ 19.5
XRN2Q9H0D6 DXO-214ENST00000495340 586 ntTSL 510.54□□□□□ -0.725e-17■■■■□ 19.5
XRN2Q9H0D6 EIF5-218ENST00000561325 569 ntTSL 43.69□□□□□ -1.823e-11■■■■□ 19.5
XRN2Q9H0D6 ALDOA-220ENST00000566846 512 ntTSL 213.4□□□□□ -0.267e-7■■■■□ 19.5
XRN2Q9H0D6 ALDOA-210ENST00000563987 586 ntTSL 212.99□□□□□ -0.337e-7■■■■□ 19.5
XRN2Q9H0D6 ALDOA-205ENST00000562168 666 ntTSL 311.7□□□□□ -0.547e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-208ENST00000572073 782 ntTSL 319.67■□□□□ 0.743e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-214ENST00000573677 646 ntTSL 415.56■□□□□ 0.083e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-218ENST00000574804 631 ntTSL 315.56■□□□□ 0.083e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-226ENST00000576364 542 ntTSL 513.87□□□□□ -0.193e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-223ENST00000575958 567 ntTSL 413.52□□□□□ -0.253e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-213ENST00000573659 578 ntTSL 412.42□□□□□ -0.423e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-212ENST00000573017 574 ntTSL 411.57□□□□□ -0.563e-7■■■■□ 19.5
XRN2Q9H0D6 BAIAP2-211ENST00000572918 626 ntTSL 47.64□□□□□ -1.193e-7■■■■□ 19.5
XRN2Q9H0D6 RPS6KA3-202ENST00000438357 530 ntTSL 518.04■□□□□ 0.481e-10■■■■□ 19.4
XRN2Q9H0D6 GSE1-205ENST00000412692 6625 ntTSL 515.16■□□□□ 0.023e-18■■■■□ 19.4
XRN2Q9H0D6 AL390719.1-206ENST00000451054 565 ntTSL 214.55□□□□□ -0.081e-6■■■■□ 19.4
XRN2Q9H0D6 AL390719.1-205ENST00000433695 540 ntTSL 213.76□□□□□ -0.211e-6■■■■□ 19.4
XRN2Q9H0D6 PTBP1-209ENST00000586481 578 ntTSL 323.59■■□□□ 1.376e-7■■■■□ 19.4
XRN2Q9H0D6 PTBP1-214ENST00000589575 749 ntTSL 315.56■□□□□ 0.086e-7■■■■□ 19.4
XRN2Q9H0D6 PTBP1-216ENST00000590887 642 ntTSL 314.06□□□□□ -0.166e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.054e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-206ENST00000428210 6776 ntTSL 213.63□□□□□ -0.234e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.954e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-212ENST00000457483 488 ntTSL 48.31□□□□□ -1.084e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-209ENST00000443240 565 ntTSL 44.85□□□□□ -1.634e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-207ENST00000436018 318 ntTSL 44.06□□□□□ -1.764e-7■■■■□ 19.4
XRN2Q9H0D6 XPO1-220ENST00000481214 720 ntTSL 22.68□□□□□ -1.984e-7■■■■□ 19.4
XRN2Q9H0D6 PUM2-206ENST00000424110 546 ntTSL 416.8■□□□□ 0.282e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.66□□□□□ -0.382e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.62e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-210ENST00000442400 955 ntTSL 59.21□□□□□ -0.942e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-207ENST00000429419 547 ntTSL 57.17□□□□□ -1.262e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-205ENST00000420234 562 ntTSL 55.28□□□□□ -1.562e-12■■■■□ 19.4
XRN2Q9H0D6 PUM2-208ENST00000432105 584 ntTSL 55.02□□□□□ -1.612e-12■■■■□ 19.4
XRN2Q9H0D6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.35■□□□□ 0.372e-8■■■■□ 19.4
XRN2Q9H0D6 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.872e-8■■■■□ 19.4
XRN2Q9H0D6 MYBBP1A-204ENST00000571354 579 ntTSL 327.88■■■□□ 2.053e-7■■■■□ 19.4
XRN2Q9H0D6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.015e-7■■■■□ 19.4
XRN2Q9H0D6 FAR2P1-206ENST00000449736 709 ntBASIC6.55□□□□□ -1.362e-11■■■■□ 19.4
XRN2Q9H0D6 KIAA0232-205ENST00000508423 700 ntTSL 225.21■■□□□ 1.632e-6■■■■□ 19.4
XRN2Q9H0D6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.262e-6■■■■□ 19.4
XRN2Q9H0D6 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.352e-6■■■■□ 19.4
XRN2Q9H0D6 KIAA0232-204ENST00000503278 563 ntTSL 45.08□□□□□ -1.62e-6■■■■□ 19.4
XRN2Q9H0D6 POLR3E-205ENST00000563024 473 ntTSL 423.5■■□□□ 1.353e-6■■■■□ 19.4
XRN2Q9H0D6 POLR3E-214ENST00000565358 565 ntTSL 423.5■■□□□ 1.353e-6■■■■□ 19.4
XRN2Q9H0D6 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.242e-6■■■■□ 19.4
XRN2Q9H0D6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.442e-6■■■■□ 19.4
XRN2Q9H0D6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.282e-6■■■■□ 19.4
XRN2Q9H0D6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.9■□□□□ 0.142e-6■■■■□ 19.4
XRN2Q9H0D6 GSE1-215ENST00000635906 666 ntTSL 314.39□□□□□ -0.111e-6■■■■□ 19.3
XRN2Q9H0D6 EGFL7-207ENST00000492862 723 ntTSL 521.85■■□□□ 1.091e-7■■■■□ 19.3
XRN2Q9H0D6 EGFL7-205ENST00000490469 456 ntTSL 520.06■□□□□ 0.81e-7■■■■□ 19.3
XRN2Q9H0D6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.2■■□□□ 1.943e-8■■■■□ 19.3
XRN2Q9H0D6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.253e-8■■■■□ 19.3
XRN2Q9H0D6 HNRNPL-207ENST00000598985 900 ntTSL 516.82■□□□□ 0.286e-7■■■■□ 19.3
XRN2Q9H0D6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.48■■□□□ 1.032e-6■■■■□ 19.3
XRN2Q9H0D6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.04■□□□□ 0.82e-6■■■■□ 19.3
XRN2Q9H0D6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.93■□□□□ 0.782e-6■■■■□ 19.3
XRN2Q9H0D6 CIRBP-234ENST00000591659 587 ntTSL 224.55■■□□□ 1.528e-8■■■■□ 19.3
XRN2Q9H0D6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.292e-6■■■■□ 19.3
XRN2Q9H0D6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.162e-6■■■■□ 19.3
XRN2Q9H0D6 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.192e-9■■■■□ 19.3
XRN2Q9H0D6 USP36-204ENST00000586066 960 ntTSL 58.74□□□□□ -1.012e-9■■■■□ 19.3
Retrieved 100 of 21,068 protein–RNA pairs in 83.5 ms