Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC94Q9BW85 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.54■■□□□ 1.04
CCDC94Q9BW85 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 Z82202.1-201ENST00000623446 1880 ntBASIC21.54■■□□□ 1.04
CCDC94Q9BW85 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CCDC94Q9BW85 AC099398.1-201ENST00000567919 2776 ntBASIC21.53■■□□□ 1.04
CCDC94Q9BW85 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 AC116351.2-201ENST00000606540 1585 ntBASIC21.53■■□□□ 1.04
CCDC94Q9BW85 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 BX119927.1-201ENST00000636596 1552 ntBASIC21.53■■□□□ 1.04
CCDC94Q9BW85 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCDC94Q9BW85 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 AC135050.7-201ENST00000624508 2218 ntBASIC21.52■■□□□ 1.04
CCDC94Q9BW85 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 PHGDH-210ENST00000641115 1638 ntBASIC21.52■■□□□ 1.04
CCDC94Q9BW85 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 AC004264.1-201ENST00000608354 794 ntBASIC21.52■■□□□ 1.04
CCDC94Q9BW85 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCDC94Q9BW85 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC94Q9BW85 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.52■■□□□ 1.03
CCDC94Q9BW85 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.03
CCDC94Q9BW85 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC94Q9BW85 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms