Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 MIR4497-201ENST00000583208 89 ntBASIC13.92□□□□□ -0.18
MUC4Q99102 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.92□□□□□ -0.18
MUC4Q99102 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
MUC4Q99102 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 AC005082.1-201ENST00000413042 2259 ntBASIC13.92□□□□□ -0.18
MUC4Q99102 AL031598.1-201ENST00000561511 1773 ntBASIC13.92□□□□□ -0.18
MUC4Q99102 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.92□□□□□ -0.18
MUC4Q99102 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.92□□□□□ -0.18
MUC4Q99102 AL121829.2-201ENST00000620908 328 ntBASIC13.92□□□□□ -0.18
MUC4Q99102 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.92□□□□□ -0.18
MUC4Q99102 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.92□□□□□ -0.18
MUC4Q99102 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MUC4Q99102 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.92□□□□□ -0.18
MUC4Q99102 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.91□□□□□ -0.18
MUC4Q99102 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
MUC4Q99102 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 Z98044.1-201ENST00000632503 1764 ntBASIC13.91□□□□□ -0.18
MUC4Q99102 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
MUC4Q99102 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
MUC4Q99102 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.91□□□□□ -0.18
MUC4Q99102 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
MUC4Q99102 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 AC026471.1-201ENST00000564629 3026 ntBASIC13.91□□□□□ -0.18
MUC4Q99102 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.91□□□□□ -0.18
MUC4Q99102 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MUC4Q99102 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MUC4Q99102 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.9□□□□□ -0.18
MUC4Q99102 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.9□□□□□ -0.18
MUC4Q99102 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
MUC4Q99102 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.9□□□□□ -0.18
MUC4Q99102 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.9□□□□□ -0.18
MUC4Q99102 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MUC4Q99102 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
MUC4Q99102 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 AP006587.1-201ENST00000534129 1502 ntBASIC13.9□□□□□ -0.18
MUC4Q99102 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MUC4Q99102 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.9□□□□□ -0.18
MUC4Q99102 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MUC4Q99102 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms