Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GCNAQ96QF7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GCNAQ96QF7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
GCNAQ96QF7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.08■□□□□ 0.8
GCNAQ96QF7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
GCNAQ96QF7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GCNAQ96QF7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
GCNAQ96QF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
GCNAQ96QF7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GCNAQ96QF7 AC099778.1-201ENST00000568593 1911 ntBASIC20.08■□□□□ 0.8
GCNAQ96QF7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AL020996.1-203ENST00000536896 2307 ntBASIC20.07■□□□□ 0.8
GCNAQ96QF7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AC092647.4-201ENST00000457211 535 ntBASIC20.07■□□□□ 0.8
GCNAQ96QF7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 COX11P1-201ENST00000489116 835 ntBASIC20.07■□□□□ 0.8
GCNAQ96QF7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AC022616.7-201ENST00000525383 220 ntBASIC20.07■□□□□ 0.8
GCNAQ96QF7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 WWOX-216ENST00000569818 525 ntBASIC20.07■□□□□ 0.8
GCNAQ96QF7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GCNAQ96QF7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.07■□□□□ 0.8
GCNAQ96QF7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 AC117947.1-201ENST00000427448 529 ntBASIC20.06■□□□□ 0.8
GCNAQ96QF7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
GCNAQ96QF7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 AL138966.2-201ENST00000621997 464 ntBASIC20.06■□□□□ 0.8
GCNAQ96QF7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNAQ96QF7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNAQ96QF7 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.05■□□□□ 0.8
GCNAQ96QF7 RNF152P1-201ENST00000397754 604 ntBASIC20.05■□□□□ 0.8
GCNAQ96QF7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 AC139887.4-201ENST00000607877 719 ntBASIC20.05■□□□□ 0.8
GCNAQ96QF7 AC141257.4-201ENST00000634557 245 ntBASIC20.05■□□□□ 0.8
GCNAQ96QF7 AC136944.6-201ENST00000634818 245 ntBASIC20.05■□□□□ 0.8
GCNAQ96QF7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
GCNAQ96QF7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms