Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CMTM3Q96MX0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CMTM3Q96MX0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CMTM3Q96MX0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 AC142381.2-201ENST00000566120 298 ntBASIC16.41■□□□□ 0.22
CMTM3Q96MX0 AL589743.5-201ENST00000616611 1050 ntBASIC16.41■□□□□ 0.22
CMTM3Q96MX0 KRT8P8-201ENST00000434750 1448 ntBASIC16.41■□□□□ 0.22
CMTM3Q96MX0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CMTM3Q96MX0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CMTM3Q96MX0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CMTM3Q96MX0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CMTM3Q96MX0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CMTM3Q96MX0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CMTM3Q96MX0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.22
CMTM3Q96MX0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
CMTM3Q96MX0 LINC00896-202ENST00000609602 2128 ntBASIC16.39■□□□□ 0.21
CMTM3Q96MX0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CMTM3Q96MX0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms