Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT9Q92600 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT9Q92600 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT9Q92600 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CNOT9Q92600 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.58■□□□□ 0.4
CNOT9Q92600 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.58■□□□□ 0.4
CNOT9Q92600 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CNOT9Q92600 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 AC006333.2-201ENST00000607957 2099 ntBASIC17.57■□□□□ 0.4
CNOT9Q92600 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT9Q92600 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNOT9Q92600 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.57■□□□□ 0.4
CNOT9Q92600 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT9Q92600 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.57■□□□□ 0.4
CNOT9Q92600 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNOT9Q92600 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.57■□□□□ 0.4
CNOT9Q92600 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CNOT9Q92600 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.57■□□□□ 0.4
CNOT9Q92600 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CNOT9Q92600 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.57■□□□□ 0.4
CNOT9Q92600 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT9Q92600 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
CNOT9Q92600 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT9Q92600 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CNOT9Q92600 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.56■□□□□ 0.4
CNOT9Q92600 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNOT9Q92600 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CNOT9Q92600 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNOT9Q92600 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT9Q92600 FEM1AP3-201ENST00000403722 1741 ntBASIC17.55■□□□□ 0.4
CNOT9Q92600 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT9Q92600 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNOT9Q92600 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 HTR7P1-201ENST00000538670 1336 ntBASIC17.55■□□□□ 0.4
CNOT9Q92600 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 ITM2C-210ENST00000620962 501 ntBASIC17.55■□□□□ 0.4
CNOT9Q92600 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 KRT8P41-201ENST00000533985 1514 ntBASIC17.55■□□□□ 0.4
CNOT9Q92600 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT9Q92600 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT9Q92600 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
CNOT9Q92600 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.55■□□□□ 0.4
CNOT9Q92600 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNOT9Q92600 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms