Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 SLC25A1P2-201ENST00000430693 912 ntBASIC19.3■□□□□ 0.68
CHD5Q8TDI0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 AC092338.2-201ENST00000568827 1415 ntBASIC19.3■□□□□ 0.68
CHD5Q8TDI0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 WWOX-216ENST00000569818 525 ntBASIC19.3■□□□□ 0.68
CHD5Q8TDI0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHD5Q8TDI0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.29■□□□□ 0.68
CHD5Q8TDI0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 EGLN1P1-201ENST00000531623 762 ntBASIC19.29■□□□□ 0.68
CHD5Q8TDI0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 AC006333.2-201ENST00000607957 2099 ntBASIC19.29■□□□□ 0.68
CHD5Q8TDI0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHD5Q8TDI0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 KRT8P45-201ENST00000414328 1447 ntBASIC19.28■□□□□ 0.68
CHD5Q8TDI0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TERF1P1-201ENST00000311003 1181 ntBASIC19.28■□□□□ 0.68
CHD5Q8TDI0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.28■□□□□ 0.68
CHD5Q8TDI0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHD5Q8TDI0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHD5Q8TDI0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms