Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC33Q8N5R6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20■□□□□ 0.79
CCDC33Q8N5R6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 TERF1P1-201ENST00000311003 1181 ntBASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC33Q8N5R6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 KRT18P16-201ENST00000510337 1294 ntBASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 SDHAP1-207ENST00000440850 2000 ntBASIC19.98■□□□□ 0.79
CCDC33Q8N5R6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 AC098818.2-201ENST00000564925 2320 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 KRT8P8-201ENST00000434750 1448 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MESTP1-201ENST00000404287 994 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 BX323043.1-201ENST00000641006 1765 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC33Q8N5R6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms