Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 AC080080.1-201ENST00000625121 2420 ntBASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 AC007322.3-201ENST00000426526 701 ntBASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 MIR4466-201ENST00000606121 54 ntBASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 AL162741.1-201ENST00000565563 1558 ntBASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CROCCP3Q8IVE0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 KRT87P-202ENST00000534226 1464 ntBASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CROCCP3Q8IVE0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CROCCP3Q8IVE0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AL645608.8-201ENST00000606034 2086 ntBASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms