Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 KRT8P8-201ENST00000434750 1448 ntBASIC18.21■□□□□ 0.51
RAB43Q86YS6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB43Q86YS6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB43Q86YS6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAB43Q86YS6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 AC004408.2-201ENST00000623613 2777 ntBASIC18.2■□□□□ 0.5
RAB43Q86YS6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 ATP5G1P1-201ENST00000448724 379 ntBASIC18.2■□□□□ 0.5
RAB43Q86YS6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 RCC2P6-201ENST00000526625 1557 ntBASIC18.2■□□□□ 0.5
RAB43Q86YS6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 AC116562.4-201ENST00000641316 2276 ntBASIC18.2■□□□□ 0.5
RAB43Q86YS6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB43Q86YS6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB43Q86YS6 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.2■□□□□ 0.5
RAB43Q86YS6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 AP000974.1-201ENST00000623909 2387 ntBASIC18.19■□□□□ 0.5
RAB43Q86YS6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 TSPY14P-201ENST00000303979 915 ntBASIC18.19■□□□□ 0.5
RAB43Q86YS6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 FAM207BP-201ENST00000447172 505 ntBASIC18.19■□□□□ 0.5
RAB43Q86YS6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 AL445228.2-201ENST00000605589 952 ntBASIC18.19■□□□□ 0.5
RAB43Q86YS6 AP000692.2-201ENST00000608391 879 ntBASIC18.19■□□□□ 0.5
RAB43Q86YS6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB43Q86YS6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RAB43Q86YS6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 ARMC10P1-201ENST00000313754 855 ntBASIC18.18■□□□□ 0.5
RAB43Q86YS6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AC130371.2-201ENST00000619443 611 ntBASIC18.18■□□□□ 0.5
RAB43Q86YS6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB43Q86YS6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB43Q86YS6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB43Q86YS6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB43Q86YS6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.17■□□□□ 0.5
RAB43Q86YS6 KRT18P35-201ENST00000510488 1269 ntBASIC18.17■□□□□ 0.5
RAB43Q86YS6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB43Q86YS6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB43Q86YS6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms