Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 AL031963.3-201ENST00000606441 850 ntBASIC12.62□□□□□ -0.39
SCXQ7RTU7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 AC133561.5-201ENST00000635547 218 ntBASIC12.62□□□□□ -0.39
SCXQ7RTU7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 PLK5-205ENST00000642079 1969 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 AC087499.1-201ENST00000418141 1075 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 AL355355.2-201ENST00000442321 338 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 AP003071.4-201ENST00000562276 1284 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 CD177P1-201ENST00000606252 935 ntBASIC12.61□□□□□ -0.39
SCXQ7RTU7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SCXQ7RTU7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.61□□□□□ -0.39
SCXQ7RTU7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 CROCCP1-201ENST00000426910 5675 ntBASIC12.6□□□□□ -0.39
SCXQ7RTU7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 FAM197Y1-201ENST00000421178 764 ntBASIC12.6□□□□□ -0.39
SCXQ7RTU7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 FAM210CP-201ENST00000445714 574 ntBASIC12.6□□□□□ -0.39
SCXQ7RTU7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 BX323043.1-201ENST00000641006 1765 ntBASIC12.6□□□□□ -0.39
SCXQ7RTU7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.6□□□□□ -0.39
SCXQ7RTU7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SCXQ7RTU7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SCXQ7RTU7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 FP700111.2-201ENST00000619190 1892 ntBASIC12.59□□□□□ -0.39
SCXQ7RTU7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.59□□□□□ -0.39
SCXQ7RTU7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC12.59□□□□□ -0.39
SCXQ7RTU7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SCXQ7RTU7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCXQ7RTU7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SCXQ7RTU7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms