Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
LCA10Q71F78 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC10.29□□□□□ -0.76
LCA10Q71F78 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LCA10Q71F78 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 Z82202.1-201ENST00000623446 1880 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
LCA10Q71F78 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 AC009237.3-201ENST00000393279 1427 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
LCA10Q71F78 BX842568.3-201ENST00000418104 571 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC10.28□□□□□ -0.76
LCA10Q71F78 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 AC126544.1-201ENST00000580842 1059 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 AC007225.1-201ENST00000566331 1836 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 AL118508.1-201ENST00000613502 2345 ntBASIC10.28□□□□□ -0.76
LCA10Q71F78 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
LCA10Q71F78 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.28□□□□□ -0.76
LCA10Q71F78 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LCA10Q71F78 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LCA10Q71F78 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms