Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 AC008403.3-201ENST00000598924 454 ntBASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXR1Q6PIV2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
FOXR1Q6PIV2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 KRT17P3-201ENST00000420566 1262 ntBASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 HLA-B-256ENST00000639848 1089 ntBASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXR1Q6PIV2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 MCRIP2P1-201ENST00000394346 511 ntBASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 RPPH1-201ENST00000516869 333 ntBASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 PNMA6B-201ENST00000538162 1200 ntBASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 AL161938.1-201ENST00000569833 2180 ntBASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXR1Q6PIV2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 DPP3P2-201ENST00000416030 1696 ntBASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms