Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRC38Q5VT99 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 AC006058.3-201ENST00000606217 1069 ntBASIC19.81■□□□□ 0.76
LRRC38Q5VT99 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 AC131212.4-201ENST00000623606 975 ntBASIC19.81■□□□□ 0.76
LRRC38Q5VT99 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRC38Q5VT99 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 AC004980.1-204ENST00000429707 299 ntBASIC19.8■□□□□ 0.76
LRRC38Q5VT99 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRC38Q5VT99 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 WIZP1-201ENST00000531444 2299 ntBASIC19.79■□□□□ 0.76
LRRC38Q5VT99 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRC38Q5VT99 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms