Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.78■□□□□ 0.28
NKX6-1P78426 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.78■□□□□ 0.28
NKX6-1P78426 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
NKX6-1P78426 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.78■□□□□ 0.28
NKX6-1P78426 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.78■□□□□ 0.28
NKX6-1P78426 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.78■□□□□ 0.28
NKX6-1P78426 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NKX6-1P78426 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
NKX6-1P78426 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
NKX6-1P78426 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NKX6-1P78426 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX6-1P78426 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NKX6-1P78426 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
NKX6-1P78426 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX6-1P78426 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX6-1P78426 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.77■□□□□ 0.28
NKX6-1P78426 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NKX6-1P78426 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.77■□□□□ 0.28
NKX6-1P78426 LINC01238-205ENST00000567549 1107 ntBASIC16.77■□□□□ 0.28
NKX6-1P78426 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.77■□□□□ 0.28
NKX6-1P78426 HLA-A-209ENST00000638375 975 ntBASIC16.77■□□□□ 0.28
NKX6-1P78426 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
NKX6-1P78426 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.77■□□□□ 0.27
NKX6-1P78426 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.77■□□□□ 0.27
NKX6-1P78426 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NKX6-1P78426 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NKX6-1P78426 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.76■□□□□ 0.27
NKX6-1P78426 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NKX6-1P78426 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 FSCN1P1-201ENST00000568912 1481 ntBASIC16.76■□□□□ 0.27
NKX6-1P78426 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NKX6-1P78426 UPK3BP1-201ENST00000428678 509 ntBASIC16.76■□□□□ 0.27
NKX6-1P78426 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.76■□□□□ 0.27
NKX6-1P78426 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.76■□□□□ 0.27
NKX6-1P78426 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 AC006011.2-201ENST00000621313 1158 ntBASIC16.76■□□□□ 0.27
NKX6-1P78426 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms