Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4XP62701 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4XP62701 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4XP62701 AC004264.1-201ENST00000608354 794 ntBASIC17.24■□□□□ 0.35
RPS4XP62701 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RPS4XP62701 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPS4XP62701 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
RPS4XP62701 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
RPS4XP62701 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.24■□□□□ 0.35
RPS4XP62701 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPS4XP62701 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.23■□□□□ 0.35
RPS4XP62701 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4XP62701 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.23■□□□□ 0.35
RPS4XP62701 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 ECEL1P3-201ENST00000427961 737 ntBASIC17.23■□□□□ 0.35
RPS4XP62701 TSPY21P-201ENST00000433481 731 ntBASIC17.23■□□□□ 0.35
RPS4XP62701 AL160286.2-201ENST00000567150 934 ntBASIC17.23■□□□□ 0.35
RPS4XP62701 AL049637.2-201ENST00000641778 930 ntBASIC17.23■□□□□ 0.35
RPS4XP62701 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPS4XP62701 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.23■□□□□ 0.35
RPS4XP62701 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RPS4XP62701 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RPS4XP62701 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.23■□□□□ 0.35
RPS4XP62701 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RPS4XP62701 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4XP62701 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
RPS4XP62701 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RPS4XP62701 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RPS4XP62701 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4XP62701 TSPY7P-201ENST00000431358 1114 ntBASIC17.22■□□□□ 0.35
RPS4XP62701 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4XP62701 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4XP62701 MIR4785-201ENST00000585005 73 ntBASIC17.22■□□□□ 0.35
RPS4XP62701 LINC01023-201ENST00000606054 436 ntBASIC17.22■□□□□ 0.35
RPS4XP62701 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.22■□□□□ 0.35
RPS4XP62701 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4XP62701 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RPS4XP62701 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
RPS4XP62701 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RPS4XP62701 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPS4XP62701 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.21■□□□□ 0.35
RPS4XP62701 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS4XP62701 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS4XP62701 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.21■□□□□ 0.35
RPS4XP62701 RARRES2P10-201ENST00000564312 460 ntBASIC17.21■□□□□ 0.35
RPS4XP62701 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.21■□□□□ 0.35
RPS4XP62701 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.21■□□□□ 0.35
RPS4XP62701 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPS4XP62701 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.21■□□□□ 0.34
RPS4XP62701 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPS4XP62701 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.21■□□□□ 0.34
RPS4XP62701 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.2■□□□□ 0.34
RPS4XP62701 Z98044.1-201ENST00000632503 1764 ntBASIC17.2■□□□□ 0.34
RPS4XP62701 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPS4XP62701 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms