Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3AP56704 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3AP56704 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.29■□□□□ 0.68
WNT3AP56704 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.29■□□□□ 0.68
WNT3AP56704 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.29■□□□□ 0.68
WNT3AP56704 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.29■□□□□ 0.68
WNT3AP56704 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.29■□□□□ 0.68
WNT3AP56704 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
WNT3AP56704 AC011298.2-201ENST00000617989 482 ntBASIC19.29■□□□□ 0.68
WNT3AP56704 AL049637.2-201ENST00000641778 930 ntBASIC19.29■□□□□ 0.68
WNT3AP56704 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3AP56704 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3AP56704 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
WNT3AP56704 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
WNT3AP56704 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
WNT3AP56704 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
WNT3AP56704 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.28■□□□□ 0.68
WNT3AP56704 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.28■□□□□ 0.68
WNT3AP56704 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
WNT3AP56704 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
WNT3AP56704 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.28■□□□□ 0.68
WNT3AP56704 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
WNT3AP56704 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.28■□□□□ 0.68
WNT3AP56704 AP001412.1-201ENST00000608405 714 ntBASIC19.28■□□□□ 0.68
WNT3AP56704 MIR6786-201ENST00000616843 113 ntBASIC19.28■□□□□ 0.68
WNT3AP56704 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.28■□□□□ 0.68
WNT3AP56704 AC130371.2-201ENST00000619443 611 ntBASIC19.28■□□□□ 0.68
WNT3AP56704 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
WNT3AP56704 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
WNT3AP56704 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.28■□□□□ 0.68
WNT3AP56704 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
WNT3AP56704 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.27■□□□□ 0.68
WNT3AP56704 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
WNT3AP56704 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.27■□□□□ 0.68
WNT3AP56704 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
WNT3AP56704 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.27■□□□□ 0.68
WNT3AP56704 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
WNT3AP56704 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.27■□□□□ 0.68
WNT3AP56704 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
WNT3AP56704 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.27■□□□□ 0.68
WNT3AP56704 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
WNT3AP56704 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 MESTP1-201ENST00000404287 994 ntBASIC19.27■□□□□ 0.68
WNT3AP56704 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.27■□□□□ 0.68
WNT3AP56704 B3GAT3P1-201ENST00000471720 806 ntBASIC19.27■□□□□ 0.68
WNT3AP56704 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 AC008550.1-201ENST00000511500 884 ntBASIC19.27■□□□□ 0.68
WNT3AP56704 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
WNT3AP56704 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
WNT3AP56704 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3AP56704 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3AP56704 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3AP56704 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3AP56704 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
WNT3AP56704 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.27■□□□□ 0.67
WNT3AP56704 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 AC006333.2-201ENST00000607957 2099 ntBASIC19.26■□□□□ 0.67
WNT3AP56704 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.26■□□□□ 0.67
WNT3AP56704 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
WNT3AP56704 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.26■□□□□ 0.67
WNT3AP56704 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.26■□□□□ 0.67
WNT3AP56704 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.26■□□□□ 0.67
WNT3AP56704 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.26■□□□□ 0.67
WNT3AP56704 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
WNT3AP56704 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
WNT3AP56704 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms