Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SOX15-203ENST00000570788 1093 ntBASIC17.28■□□□□ 0.36
CENPAP49450 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.28■□□□□ 0.36
CENPAP49450 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
CENPAP49450 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CENPAP49450 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CENPAP49450 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.28■□□□□ 0.36
CENPAP49450 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPAP49450 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 ZNF815P-204ENST00000434898 1737 ntBASIC17.27■□□□□ 0.36
CENPAP49450 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CENPAP49450 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CENPAP49450 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPAP49450 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.27■□□□□ 0.36
CENPAP49450 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.27■□□□□ 0.36
CENPAP49450 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 MYC-209ENST00000641252 345 ntBASIC17.27■□□□□ 0.36
CENPAP49450 AC133041.1-202ENST00000642053 222 ntBASIC17.27■□□□□ 0.36
CENPAP49450 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CENPAP49450 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CENPAP49450 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPAP49450 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.27■□□□□ 0.35
CENPAP49450 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CENPAP49450 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPAP49450 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CENPAP49450 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.27■□□□□ 0.35
CENPAP49450 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.27■□□□□ 0.35
CENPAP49450 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CENPAP49450 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.26■□□□□ 0.35
CENPAP49450 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CENPAP49450 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CENPAP49450 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CENPAP49450 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPAP49450 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CENPAP49450 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.26■□□□□ 0.35
CENPAP49450 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.26■□□□□ 0.35
CENPAP49450 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CENPAP49450 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CENPAP49450 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 AC141586.3-201ENST00000562166 1838 ntBASIC17.26■□□□□ 0.35
CENPAP49450 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPAP49450 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.26■□□□□ 0.35
CENPAP49450 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CENPAP49450 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.26■□□□□ 0.35
CENPAP49450 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.25■□□□□ 0.35
CENPAP49450 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.25■□□□□ 0.35
CENPAP49450 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CENPAP49450 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CENPAP49450 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.25■□□□□ 0.35
CENPAP49450 YBX1P10-201ENST00000444752 975 ntBASIC17.25■□□□□ 0.35
CENPAP49450 AC090192.1-201ENST00000517740 490 ntBASIC17.25■□□□□ 0.35
CENPAP49450 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.25■□□□□ 0.35
CENPAP49450 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPAP49450 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.25■□□□□ 0.35
CENPAP49450 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPAP49450 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.25■□□□□ 0.35
CENPAP49450 AC083880.1-201ENST00000608266 535 ntBASIC17.25■□□□□ 0.35
CENPAP49450 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms