Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.18■□□□□ 0.66
MDH1P40925 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 TNRC18P3-201ENST00000441896 2691 ntBASIC19.18■□□□□ 0.66
MDH1P40925 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 AC104417.2-201ENST00000562989 1793 ntBASIC19.18■□□□□ 0.66
MDH1P40925 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MDH1P40925 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.18■□□□□ 0.66
MDH1P40925 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.18■□□□□ 0.66
MDH1P40925 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MDH1P40925 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.17■□□□□ 0.66
MDH1P40925 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MDH1P40925 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MDH1P40925 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.17■□□□□ 0.66
MDH1P40925 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.17■□□□□ 0.66
MDH1P40925 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 AL136116.3-201ENST00000402907 1138 ntBASIC19.17■□□□□ 0.66
MDH1P40925 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.17■□□□□ 0.66
MDH1P40925 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MDH1P40925 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MDH1P40925 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.16■□□□□ 0.66
MDH1P40925 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.16■□□□□ 0.66
MDH1P40925 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.16■□□□□ 0.66
MDH1P40925 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.16■□□□□ 0.66
MDH1P40925 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.16■□□□□ 0.66
MDH1P40925 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 HCG11-201ENST00000411553 5696 ntBASIC19.16■□□□□ 0.66
MDH1P40925 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MDH1P40925 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.16■□□□□ 0.66
MDH1P40925 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MDH1P40925 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MDH1P40925 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
MDH1P40925 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.15■□□□□ 0.66
MDH1P40925 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.15■□□□□ 0.66
MDH1P40925 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MDH1P40925 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 AC012317.2-201ENST00000623305 2251 ntBASIC19.15■□□□□ 0.66
MDH1P40925 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MDH1P40925 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms