Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX6P35712 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SOX6P35712 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX6P35712 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX6P35712 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX6P35712 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX6P35712 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX6P35712 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX6P35712 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX6P35712 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX6P35712 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX6P35712 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX6P35712 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SOX6P35712 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SOX6P35712 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.09■□□□□ 0.33
SOX6P35712 AL031963.3-201ENST00000606441 850 ntBASIC17.09■□□□□ 0.33
SOX6P35712 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX6P35712 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 KRT8P20-201ENST00000423953 1409 ntBASIC17.09■□□□□ 0.33
SOX6P35712 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.09■□□□□ 0.33
SOX6P35712 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 PTBP1P-201ENST00000554374 1601 ntBASIC17.09■□□□□ 0.33
SOX6P35712 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SOX6P35712 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX6P35712 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SOX6P35712 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SOX6P35712 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX6P35712 OR6D1P-203ENST00000641209 4860 ntBASIC17.09■□□□□ 0.33
SOX6P35712 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SOX6P35712 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SOX6P35712 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SOX6P35712 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SOX6P35712 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SOX6P35712 IRX1P1-201ENST00000438849 1838 ntBASIC17.08■□□□□ 0.33
SOX6P35712 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX6P35712 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX6P35712 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SOX6P35712 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SOX6P35712 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 PHGDH-210ENST00000641115 1638 ntBASIC17.08■□□□□ 0.32
SOX6P35712 KRT87P-202ENST00000534226 1464 ntBASIC17.08■□□□□ 0.32
SOX6P35712 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.08■□□□□ 0.32
SOX6P35712 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SOX6P35712 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.08■□□□□ 0.32
SOX6P35712 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX6P35712 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 AC091799.1-201ENST00000422823 811 ntBASIC17.08■□□□□ 0.32
SOX6P35712 AC097381.1-201ENST00000429019 1296 ntBASIC17.08■□□□□ 0.32
SOX6P35712 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX6P35712 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.08■□□□□ 0.32
SOX6P35712 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX6P35712 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.07■□□□□ 0.32
SOX6P35712 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms