Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 AP000692.2-201ENST00000608391 879 ntBASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 KRT8P8-201ENST00000434750 1448 ntBASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 AL158211.5-201ENST00000623583 2518 ntBASIC18.4■□□□□ 0.54
CCNYL3P0C7X3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.39■□□□□ 0.54
CCNYL3P0C7X3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 RCC2P6-201ENST00000526625 1557 ntBASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 AP001271.2-201ENST00000624018 1556 ntBASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 HLA-A-209ENST00000638375 975 ntBASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCNYL3P0C7X3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 FAM207BP-201ENST00000447172 505 ntBASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 ECEL1P2-202ENST00000465689 757 ntBASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCNYL3P0C7X3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 AC073508.3-201ENST00000619697 1419 ntBASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNYL3P0C7X3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms