Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CTSBP07858 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSBP07858 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSBP07858 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.08■□□□□ 0.49
CTSBP07858 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSBP07858 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.49
CTSBP07858 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.08■□□□□ 0.49
CTSBP07858 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.08■□□□□ 0.49
CTSBP07858 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.08■□□□□ 0.49
CTSBP07858 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSBP07858 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CTSBP07858 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSBP07858 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSBP07858 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSBP07858 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTSBP07858 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSBP07858 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSBP07858 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 IRX1P1-201ENST00000438849 1838 ntBASIC18.07■□□□□ 0.48
CTSBP07858 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.07■□□□□ 0.48
CTSBP07858 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 AC139887.4-201ENST00000607877 719 ntBASIC18.07■□□□□ 0.48
CTSBP07858 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTSBP07858 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSBP07858 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTSBP07858 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CTSBP07858 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTSBP07858 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CTSBP07858 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.06■□□□□ 0.48
CTSBP07858 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSBP07858 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CTSBP07858 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.06■□□□□ 0.48
CTSBP07858 AC117947.1-201ENST00000427448 529 ntBASIC18.06■□□□□ 0.48
CTSBP07858 DUX4L26-201ENST00000489078 1255 ntBASIC18.06■□□□□ 0.48
CTSBP07858 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.06■□□□□ 0.48
CTSBP07858 AL445228.2-201ENST00000605589 952 ntBASIC18.06■□□□□ 0.48
CTSBP07858 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTSBP07858 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTSBP07858 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSBP07858 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CTSBP07858 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTSBP07858 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.05■□□□□ 0.48
CTSBP07858 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.05■□□□□ 0.48
CTSBP07858 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTSBP07858 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms