Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.81■□□□□ 0.44
PDGFAP04085 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 KRT18P48-201ENST00000434763 852 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 AL359075.1-203ENST00000462729 1002 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 AL441883.1-201ENST00000566170 1045 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 AL353719.1-201ENST00000566847 864 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 AC093458.2-201ENST00000623150 629 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 AL023973.1-201ENST00000624619 620 ntBASIC17.81■□□□□ 0.44
PDGFAP04085 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PDGFAP04085 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFAP04085 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFAP04085 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 IER3-202ENST00000376377 1350 ntBASIC17.8■□□□□ 0.44
PDGFAP04085 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PDGFAP04085 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PDGFAP04085 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDGFAP04085 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 TPM4P1-201ENST00000436100 807 ntBASIC17.8■□□□□ 0.44
PDGFAP04085 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 DUSP5P1-201ENST00000441325 1139 ntBASIC17.8■□□□□ 0.44
PDGFAP04085 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.8■□□□□ 0.44
PDGFAP04085 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.8■□□□□ 0.44
PDGFAP04085 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.8■□□□□ 0.44
PDGFAP04085 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFAP04085 AC098818.2-201ENST00000564925 2320 ntBASIC17.8■□□□□ 0.44
PDGFAP04085 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.79■□□□□ 0.44
PDGFAP04085 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.79■□□□□ 0.44
PDGFAP04085 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFAP04085 TSPY17P-201ENST00000450329 467 ntBASIC17.79■□□□□ 0.44
PDGFAP04085 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.79■□□□□ 0.44
PDGFAP04085 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFAP04085 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.79■□□□□ 0.44
PDGFAP04085 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.79■□□□□ 0.44
PDGFAP04085 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.79■□□□□ 0.44
PDGFAP04085 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.79■□□□□ 0.44
PDGFAP04085 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDGFAP04085 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDGFAP04085 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms