Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NUDT16P1-203ENST00000513809 620 ntBASIC17.63■□□□□ 0.41
NKX2-2O95096 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX2-2O95096 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.63■□□□□ 0.41
NKX2-2O95096 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NKX2-2O95096 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
NKX2-2O95096 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NKX2-2O95096 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.62■□□□□ 0.41
NKX2-2O95096 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.62■□□□□ 0.41
NKX2-2O95096 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NKX2-2O95096 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NKX2-2O95096 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
NKX2-2O95096 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 FAM207BP-201ENST00000447172 505 ntBASIC17.62■□□□□ 0.41
NKX2-2O95096 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX2-2O95096 AC008550.1-201ENST00000511500 884 ntBASIC17.62■□□□□ 0.41
NKX2-2O95096 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX2-2O95096 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.62■□□□□ 0.41
NKX2-2O95096 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.62■□□□□ 0.41
NKX2-2O95096 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NKX2-2O95096 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NKX2-2O95096 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NKX2-2O95096 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NKX2-2O95096 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.62■□□□□ 0.41
NKX2-2O95096 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
NKX2-2O95096 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NKX2-2O95096 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX2-2O95096 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.61■□□□□ 0.41
NKX2-2O95096 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.61■□□□□ 0.41
NKX2-2O95096 AP000692.2-201ENST00000608391 879 ntBASIC17.61■□□□□ 0.41
NKX2-2O95096 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.61■□□□□ 0.41
NKX2-2O95096 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
NKX2-2O95096 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NKX2-2O95096 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NKX2-2O95096 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NKX2-2O95096 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 MIR718-201ENST00000390190 70 ntBASIC17.6■□□□□ 0.41
NKX2-2O95096 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.6■□□□□ 0.41
NKX2-2O95096 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
NKX2-2O95096 CKBP1-201ENST00000565489 1086 ntBASIC17.6■□□□□ 0.41
NKX2-2O95096 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.6■□□□□ 0.41
NKX2-2O95096 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NKX2-2O95096 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NKX2-2O95096 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.6■□□□□ 0.41
NKX2-2O95096 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX2-2O95096 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.6■□□□□ 0.41
NKX2-2O95096 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 CROCCP3-202ENST00000420820 1947 ntBASIC17.6■□□□□ 0.41
NKX2-2O95096 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NKX2-2O95096 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms