Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA3DO95025 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SEMA3DO95025 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.27■□□□□ 0.52
SEMA3DO95025 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA3DO95025 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.27■□□□□ 0.52
SEMA3DO95025 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 KSR1P1-201ENST00000446298 240 ntBASIC18.27■□□□□ 0.52
SEMA3DO95025 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.27■□□□□ 0.52
SEMA3DO95025 Z85996.1-201ENST00000494644 937 ntBASIC18.27■□□□□ 0.52
SEMA3DO95025 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA3DO95025 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.27■□□□□ 0.52
SEMA3DO95025 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEMA3DO95025 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA3DO95025 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA3DO95025 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA3DO95025 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SEMA3DO95025 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SEMA3DO95025 FEM1AP3-201ENST00000403722 1741 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.26■□□□□ 0.51
SEMA3DO95025 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SEMA3DO95025 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SEMA3DO95025 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.26■□□□□ 0.51
SEMA3DO95025 AL359736.2-201ENST00000621992 437 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 AC131212.4-201ENST00000623606 975 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 KRT8P41-201ENST00000533985 1514 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 TNXA-203ENST00000507684 2038 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SEMA3DO95025 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SEMA3DO95025 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.26■□□□□ 0.51
SEMA3DO95025 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SEMA3DO95025 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SEMA3DO95025 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.25■□□□□ 0.51
SEMA3DO95025 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.25■□□□□ 0.51
SEMA3DO95025 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SEMA3DO95025 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SEMA3DO95025 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SEMA3DO95025 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SEMA3DO95025 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.24■□□□□ 0.51
SEMA3DO95025 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
SEMA3DO95025 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SEMA3DO95025 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
SEMA3DO95025 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms