Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.76■□□□□ 0.43
SOX30O94993 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX30O94993 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.76■□□□□ 0.43
SOX30O94993 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.76■□□□□ 0.43
SOX30O94993 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SOX30O94993 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SOX30O94993 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.75■□□□□ 0.43
SOX30O94993 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 IRX1P1-201ENST00000438849 1838 ntBASIC17.75■□□□□ 0.43
SOX30O94993 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SOX30O94993 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.75■□□□□ 0.43
SOX30O94993 GCSHP5-201ENST00000443090 522 ntBASIC17.75■□□□□ 0.43
SOX30O94993 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 PRSS44-201ENST00000515154 1146 ntBASIC17.75■□□□□ 0.43
SOX30O94993 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.75■□□□□ 0.43
SOX30O94993 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.75■□□□□ 0.43
SOX30O94993 AC020763.4-201ENST00000623414 4170 ntBASIC17.75■□□□□ 0.43
SOX30O94993 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SOX30O94993 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.75■□□□□ 0.43
SOX30O94993 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX30O94993 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SOX30O94993 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.74■□□□□ 0.43
SOX30O94993 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 AC073195.1-201ENST00000607241 877 ntBASIC17.74■□□□□ 0.43
SOX30O94993 FAM197Y4-202ENST00000622692 608 ntBASIC17.74■□□□□ 0.43
SOX30O94993 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX30O94993 AL031985.4-201ENST00000642138 673 ntBASIC17.74■□□□□ 0.43
SOX30O94993 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SOX30O94993 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX30O94993 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.74■□□□□ 0.43
SOX30O94993 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.74■□□□□ 0.43
SOX30O94993 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 AL161938.1-201ENST00000569833 2180 ntBASIC17.74■□□□□ 0.43
SOX30O94993 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SOX30O94993 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SOX30O94993 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SOX30O94993 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SOX30O94993 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
SOX30O94993 KRT16P1-201ENST00000399124 1418 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms