Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.59■□□□□ 0.41
TO15178 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.59■□□□□ 0.41
TO15178 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TO15178 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TO15178 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
TO15178 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TO15178 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.58■□□□□ 0.41
TO15178 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.58■□□□□ 0.41
TO15178 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TO15178 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.58■□□□□ 0.4
TO15178 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
TO15178 MFAP1P1-201ENST00000442257 1255 ntBASIC17.58■□□□□ 0.4
TO15178 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.58■□□□□ 0.4
TO15178 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TO15178 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
TO15178 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.58■□□□□ 0.4
TO15178 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TO15178 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TO15178 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TO15178 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.57■□□□□ 0.4
TO15178 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 TSPY15P-201ENST00000457163 923 ntBASIC17.57■□□□□ 0.4
TO15178 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.57■□□□□ 0.4
TO15178 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
TO15178 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.57■□□□□ 0.4
TO15178 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
TO15178 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TO15178 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TO15178 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
TO15178 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.56■□□□□ 0.4
TO15178 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
TO15178 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.56■□□□□ 0.4
TO15178 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 CRYGFP-201ENST00000418459 633 ntBASIC17.56■□□□□ 0.4
TO15178 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 AP000525.1-201ENST00000608286 694 ntBASIC17.56■□□□□ 0.4
TO15178 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.56■□□□□ 0.4
TO15178 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TO15178 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
TO15178 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.55■□□□□ 0.4
TO15178 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TO15178 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.55■□□□□ 0.4
TO15178 CA15P1-201ENST00000481698 905 ntBASIC17.55■□□□□ 0.4
TO15178 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.55■□□□□ 0.4
TO15178 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.55■□□□□ 0.4
TO15178 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.55■□□□□ 0.4
TO15178 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TO15178 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.55■□□□□ 0.4
TO15178 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.55■□□□□ 0.4
TO15178 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.55■□□□□ 0.4
TO15178 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
TO15178 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.55■□□□□ 0.4
TO15178 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.55■□□□□ 0.4
TO15178 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TO15178 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms