Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC009113.1-201ENST00000570267 2443 ntBASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 AC103702.1-201ENST00000548801 2630 ntBASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SIRPAP1-201ENST00000448467 1770 ntBASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 USP45-205ENST00000472914 1617 ntTSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.6□□□□□ -0.71
CHKB-CPT1BH3BT56 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 MYO15B-237ENST00000642007 4893 ntBASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC10.59□□□□□ -0.71
CHKB-CPT1BH3BT56 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms