Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
NACAE9PAV3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.93□□□□□ -0.18
NACAE9PAV3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.93□□□□□ -0.18
NACAE9PAV3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
NACAE9PAV3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.93□□□□□ -0.18
NACAE9PAV3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.93□□□□□ -0.18
NACAE9PAV3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NACAE9PAV3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NACAE9PAV3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NACAE9PAV3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 AC004408.2-201ENST00000623613 2777 ntBASIC13.92□□□□□ -0.18
NACAE9PAV3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 UBE2SP1-201ENST00000450587 669 ntBASIC13.92□□□□□ -0.18
NACAE9PAV3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.92□□□□□ -0.18
NACAE9PAV3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.92□□□□□ -0.18
NACAE9PAV3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.92□□□□□ -0.18
NACAE9PAV3 ZNF815P-204ENST00000434898 1737 ntBASIC13.92□□□□□ -0.18
NACAE9PAV3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NACAE9PAV3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 HLA-G-202ENST00000376815 851 ntBASIC13.92□□□□□ -0.18
NACAE9PAV3 HLA-G-203ENST00000376818 1127 ntBASIC13.92□□□□□ -0.18
NACAE9PAV3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.92□□□□□ -0.18
NACAE9PAV3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NACAE9PAV3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 BX323043.1-201ENST00000641006 1765 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 AL596275.1-201ENST00000423464 877 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.91□□□□□ -0.18
NACAE9PAV3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 AP006294.2-201ENST00000641667 209 ntBASIC13.91□□□□□ -0.18
NACAE9PAV3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.91□□□□□ -0.18
NACAE9PAV3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.91□□□□□ -0.18
NACAE9PAV3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NACAE9PAV3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms