Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 USP48-203ENST00000374732 3037 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RNU4-15P-201ENST00000362613 141 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RNU1-46P-201ENST00000384425 164 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RPL21P65-201ENST00000406094 466 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MIR4310-201ENST00000582950 57 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 RN7SL261P-201ENST00000613441 282 ntBASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF39Q9H2S5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AC092111.1-201ENST00000618256 3358 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 STAG3L4-201ENST00000352103 530 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AC009237.10-201ENST00000414112 510 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AC094019.1-201ENST00000434678 472 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 RPL37P4-201ENST00000448908 268 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 RPL10P17-201ENST00000453852 316 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 PCGEM1.1-201ENST00000613431 131 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AP005435.3-201ENST00000531260 3198 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AC139713.2-214ENST00000642059 1811 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 MAPK10-383ENST00000642032 3390 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF39Q9H2S5 AP003486.1-201ENST00000525716 3994 ntBASIC6.98□□□□□ -1.29
RNF39Q9H2S5 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 RNA5SP390-201ENST00000410191 113 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 RPL31P63-201ENST00000422565 375 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 SPINT5P-201ENST00000448174 155 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 NXT1P1-201ENST00000458481 316 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AIG1P1-201ENST00000503376 148 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 RNA5SP20-201ENST00000515976 84 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 HSPE1P18-201ENST00000517602 280 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AL021997.2-201ENST00000615674 271 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 MIR1910-201ENST00000636955 80 ntBASIC6.97□□□□□ -1.29
RNF39Q9H2S5 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF39Q9H2S5 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF39Q9H2S5 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms