RNA–Protein interactions for RNA: ENST00000517272.1

RNU4ATAC17P-201, Transcript of RNA, U4atac small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU4ATAC17P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC17P-201ENST00000517272 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
RNU4ATAC17P-201ENST00000517272 CHIC1Q5VXU3 224 aa10.89□□□□□ -0.67
RNU4ATAC17P-201ENST00000517272 PHF23Q9BUL5 403 aaPredicted RBP9.61□□□□□ -0.87
RNU4ATAC17P-201ENST00000517272 SENP3Q9H4L4 574 aaPredicted RBP9.53□□□□□ -0.88
RNU4ATAC17P-201ENST00000517272 FOXD1Q16676 465 aa8.88□□□□□ -0.99
RNU4ATAC17P-201ENST00000517272 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
RNU4ATAC17P-201ENST00000517272 ADRA2BP18089 450 aa8.58□□□□□ -1.04
RNU4ATAC17P-201ENST00000517272 PPP6R1Q9UPN7 881 aa8.53□□□□□ -1.04
RNU4ATAC17P-201ENST00000517272 PIAS4Q8N2W9 510 aaPredicted RBP8.44□□□□□ -1.06
RNU4ATAC17P-201ENST00000517272 MSH5O43196 834 aa8.17□□□□□ -1.1
RNU4ATAC17P-201ENST00000517272 DNAJC5BQ9UF47 199 aa7.9□□□□□ -1.14
RNU4ATAC17P-201ENST00000517272 NISCHQ9Y2I1 1504 aa7.83□□□□□ -1.16
RNU4ATAC17P-201ENST00000517272 PPP4R3CPQ6ZMV5 832 aa7.82□□□□□ -1.16
RNU4ATAC17P-201ENST00000517272 ABCC9O60706 1549 aa7.82□□□□□ -1.16
RNU4ATAC17P-201ENST00000517272 MAPK8IP2Q13387 824 aaPredicted RBP7.8□□□□□ -1.16
RNU4ATAC17P-201ENST00000517272 SCAF1Q9H7N4 1312 aaKnown RBP7.76□□□□□ -1.17
RNU4ATAC17P-201ENST00000517272 DNAJC5Q9H3Z4 198 aa7.69□□□□□ -1.18
RNU4ATAC17P-201ENST00000517272 KCNA4P22459 653 aa7.63□□□□□ -1.19
RNU4ATAC17P-201ENST00000517272 NCBP3Q53F19 620 aaKnown RBP7.58□□□□□ -1.2
RNU4ATAC17P-201ENST00000517272 POTEDQ86YR6 584 aa7.58□□□□□ -1.2
RNU4ATAC17P-201ENST00000517272 DMRT2Q9Y5R5 561 aa7.58□□□□□ -1.2
RNU4ATAC17P-201ENST00000517272 CNKSR2Q8WXI2 1034 aa7.56□□□□□ -1.2
RNU4ATAC17P-201ENST00000517272 DCAF8L1A6NGE4 600 aa7.5□□□□□ -1.21
RNU4ATAC17P-201ENST00000517272 NPM3O75607 178 aaKnown RBP7.49□□□□□ -1.21
RNU4ATAC17P-201ENST00000517272 RNF216Q9NWF9 866 aaPredicted RBP7.4□□□□□ -1.22
RNU4ATAC17P-201ENST00000517272 HOXD11P31277 338 aaPredicted RBP7.35□□□□□ -1.23
RNU4ATAC17P-201ENST00000517272 CCDC180Q9P1Z9 1646 aa7.29□□□□□ -1.24
RNU4ATAC17P-201ENST00000517272 SLC4A1APQ9BWU0 796 aaKnown RBP7.26□□□□□ -1.25
RNU4ATAC17P-201ENST00000517272 RB1CC1Q8TDY2 1594 aa7.2□□□□□ -1.26
RNU4ATAC17P-201ENST00000517272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU4ATAC17P-201ENST00000517272 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
RNU4ATAC17P-201ENST00000517272 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
RNU4ATAC17P-201ENST00000517272 CECR2Q9BXF3 1484 aa7.12□□□□□ -1.27
RNU4ATAC17P-201ENST00000517272 UNC13AQ9UPW8 1703 aa7.07□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 CC2D2AQ9P2K1 1620 aa7.06□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 SLC4A2P04920 1241 aa7.06□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 BICRAQ9NZM4 1560 aa7.04□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 TRIM41Q8WV44 630 aa7.04□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 NACADO15069 1562 aa7.03□□□□□ -1.28
RNU4ATAC17P-201ENST00000517272 CUX2O14529 1486 aa7.02□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 ZBTB22O15209 634 aa7□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 RNF39Q9H2S5 420 aa6.99□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 U3KPZ7 1027 aaPredicted RBP6.99□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 FOXD4L1Q9NU39 408 aa6.98□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 CACNB1Q02641 598 aaPredicted RBP6.97□□□□□ -1.29
RNU4ATAC17P-201ENST00000517272 EIF4G1Q04637 1599 aaKnown RBP6.91□□□□□ -1.3
RNU4ATAC17P-201ENST00000517272 MYCNP04198 464 aaPredicted RBP6.9□□□□□ -1.3
RNU4ATAC17P-201ENST00000517272 CSRNP3Q8WYN3 585 aa6.9□□□□□ -1.3
RNU4ATAC17P-201ENST00000517272 CAPN15O75808 1086 aa6.89□□□□□ -1.31
RNU4ATAC17P-201ENST00000517272 SHROOM4Q9ULL8 1493 aa6.89□□□□□ -1.31
RNU4ATAC17P-201ENST00000517272 C1QBPQ07021 282 aaKnown RBP6.88□□□□□ -1.31
RNU4ATAC17P-201ENST00000517272 TRHP20396 242 aaPredicted RBP6.87□□□□□ -1.31
RNU4ATAC17P-201ENST00000517272 SPINK5Q9NQ38 1064 aaPredicted RBP6.87□□□□□ -1.31
RNU4ATAC17P-201ENST00000517272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 HNRNPUL2Q1KMD3 747 aaKnown RBP6.83□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 DCAF8L2P0C7V8 631 aa6.8□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 ABCB7O75027 752 aa6.79□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 ATF5Q9Y2D1 282 aaPredicted RBP6.78□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 ERCC6Q03468 1493 aa6.78□□□□□ -1.32
RNU4ATAC17P-201ENST00000517272 MYO15BQ96JP2 1530 aa6.77□□□□□ -1.33
RNU4ATAC17P-201ENST00000517272 APLP2Q06481 763 aa6.77□□□□□ -1.33
RNU4ATAC17P-201ENST00000517272 ZNF219Q9P2Y4 722 aaPredicted RBP6.71□□□□□ -1.34
RNU4ATAC17P-201ENST00000517272 POLA2Q14181 598 aa6.68□□□□□ -1.34
RNU4ATAC17P-201ENST00000517272 DSG3P32926 999 aa6.66□□□□□ -1.34
RNU4ATAC17P-201ENST00000517272 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
RNU4ATAC17P-201ENST00000517272 ATXN8OSP0DMR3 200 aa6.64□□□□□ -1.35
RNU4ATAC17P-201ENST00000517272 THOC2Q8NI27 1593 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC17P-201ENST00000517272 SCRIBQ14160 1630 aa6.59□□□□□ -1.35
RNU4ATAC17P-201ENST00000517272 OSCARQ8IYS5 282 aa6.59□□□□□ -1.35
RNU4ATAC17P-201ENST00000517272 RIMBP3CA6NJZ7 1639 aa6.56□□□□□ -1.36
RNU4ATAC17P-201ENST00000517272 RIMBP3BA6NNM3 1639 aa6.56□□□□□ -1.36
RNU4ATAC17P-201ENST00000517272 NESP48681 1621 aa6.56□□□□□ -1.36
RNU4ATAC17P-201ENST00000517272 RIMBP3Q9UFD9 1639 aa6.56□□□□□ -1.36
RNU4ATAC17P-201ENST00000517272 BAZ1AQ9NRL2 1556 aaPredicted RBP6.55□□□□□ -1.36
RNU4ATAC17P-201ENST00000517272 NCAPD3P42695 1498 aa6.52□□□□□ -1.37
RNU4ATAC17P-201ENST00000517272 FBLN2P98095 1184 aa6.49□□□□□ -1.37
RNU4ATAC17P-201ENST00000517272 ARHGEF11O15085 1522 aa6.48□□□□□ -1.37
RNU4ATAC17P-201ENST00000517272 SMARCA2P51531 1590 aa6.48□□□□□ -1.37
RNU4ATAC17P-201ENST00000517272 KIF21AQ7Z4S6 1674 aa6.46□□□□□ -1.37
RNU4ATAC17P-201ENST00000517272 CYB5RLQ6IPT4 315 aa6.46□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 ZBTB12Q9Y330 459 aaPredicted RBP6.46□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 DCAF1Q9Y4B6 1507 aa6.45□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 LAMC3Q9Y6N6 1575 aa6.44□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 MKRN4PQ13434 485 aaPredicted RBP6.44□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 PDS5BQ9NTI5 1447 aa6.41□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 WDR62O43379 1518 aa6.4□□□□□ -1.38
RNU4ATAC17P-201ENST00000517272 MRC2Q9UBG0 1479 aa6.39□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 ATAD2BQ9ULI0 1458 aa6.39□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 HMGXB3Q12766 1538 aa6.39□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 ARAP1Q96P48 1450 aa6.37□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 ZCCHC6Q5VYS8 1495 aaKnown RBP6.36□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 ZNF692Q9BU19 519 aaPredicted RBP6.35□□□□□ -1.39
RNU4ATAC17P-201ENST00000517272 FKBP8Q14318 412 aa6.33□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 RBM42Q9BTD8 480 aaKnown RBP6.33□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 SPDYE4A6NLX3 237 aa6.32□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 SPDYE2BA6NHP3 402 aa6.28□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 SPDYE6P0CI01 402 aa6.28□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 SPDYE2Q495Y8 402 aa6.28□□□□□ -1.4
RNU4ATAC17P-201ENST00000517272 RSF1Q96T23 1441 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms