RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
CPNE8-202ENST00000360449 AEBP2Q6ZN18 517 aaPredicted RBP11.62□□□□□ -0.55
CPNE8-202ENST00000360449 PHF23Q9BUL5 403 aaPredicted RBP10.65□□□□□ -0.7
CPNE8-202ENST00000360449 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
CPNE8-202ENST00000360449 SENP3Q9H4L4 574 aaPredicted RBP9.91□□□□□ -0.82
CPNE8-202ENST00000360449 EHMT2Q96KQ7 1210 aa9.8□□□□□ -0.84
CPNE8-202ENST00000360449 KCNA4P22459 653 aa9.58□□□□□ -0.88
CPNE8-202ENST00000360449 POTEDQ86YR6 584 aa9.5□□□□□ -0.89
CPNE8-202ENST00000360449 ADRA2BP18089 450 aa9.39□□□□□ -0.91
CPNE8-202ENST00000360449 CSRNP3Q8WYN3 585 aa9.35□□□□□ -0.91
CPNE8-202ENST00000360449 SLC4A1APQ9BWU0 796 aaKnown RBP9.31□□□□□ -0.92
CPNE8-202ENST00000360449 SLC24A1O60721 1099 aa9.25□□□□□ -0.93
CPNE8-202ENST00000360449 PPP6R1Q9UPN7 881 aa9.15□□□□□ -0.94
CPNE8-202ENST00000360449 NCBP3Q53F19 620 aaKnown RBP9.11□□□□□ -0.95
CPNE8-202ENST00000360449 PPP4R3CPQ6ZMV5 832 aa9.03□□□□□ -0.96
CPNE8-202ENST00000360449 AMER1Q5JTC6 1135 aaPredicted RBP9.01□□□□□ -0.97
CPNE8-202ENST00000360449 FOXD1Q16676 465 aa8.99□□□□□ -0.97
CPNE8-202ENST00000360449 RTN4Q9NQC3 1192 aaKnown RBP8.89□□□□□ -0.99
CPNE8-202ENST00000360449 NPM3O75607 178 aaKnown RBP8.85□□□□□ -0.99
CPNE8-202ENST00000360449 ZBTB22O15209 634 aa8.78□□□□□ -1
CPNE8-202ENST00000360449 PIAS4Q8N2W9 510 aaPredicted RBP8.71□□□□□ -1.01
CPNE8-202ENST00000360449 FOXD4L1Q9NU39 408 aa8.7□□□□□ -1.02
CPNE8-202ENST00000360449 CNKSR2Q8WXI2 1034 aa8.67□□□□□ -1.02
CPNE8-202ENST00000360449 SCAF1Q9H7N4 1312 aaKnown RBP8.61□□□□□ -1.03
CPNE8-202ENST00000360449 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
CPNE8-202ENST00000360449 FKBP8Q14318 412 aa8.45□□□□□ -1.06
CPNE8-202ENST00000360449 ATXN8OSP0DMR3 200 aa8.38□□□□□ -1.07
CPNE8-202ENST00000360449 RNF216Q9NWF9 866 aaPredicted RBP8.33□□□□□ -1.08
CPNE8-202ENST00000360449 MYCNP04198 464 aaPredicted RBP8.24□□□□□ -1.09
CPNE8-202ENST00000360449 PLCB2Q00722 1185 aa8.22□□□□□ -1.09
CPNE8-202ENST00000360449 BCANQ96GW7 911 aa8.19□□□□□ -1.1
CPNE8-202ENST00000360449 MSH5O43196 834 aa8.15□□□□□ -1.1
CPNE8-202ENST00000360449 SLC4A2P04920 1241 aa8.15□□□□□ -1.1
CPNE8-202ENST00000360449 MAPK8IP2Q13387 824 aaPredicted RBP8.12□□□□□ -1.11
CPNE8-202ENST00000360449 HAP1P54257 671 aaPredicted RBP8.1□□□□□ -1.11
CPNE8-202ENST00000360449 HOXD11P31277 338 aaPredicted RBP8.09□□□□□ -1.11
CPNE8-202ENST00000360449 FBXO3Q9UK99 471 aa8.07□□□□□ -1.12
CPNE8-202ENST00000360449 TAOK2Q9UL54 1235 aa8.06□□□□□ -1.12
CPNE8-202ENST00000360449 VSIG10Q8N0Z9 540 aa8.05□□□□□ -1.12
CPNE8-202ENST00000360449 PRKCSHP14314 528 aaPredicted RBP7.99□□□□□ -1.13
CPNE8-202ENST00000360449 DMRT2Q9Y5R5 561 aa7.97□□□□□ -1.13
CPNE8-202ENST00000360449 DCAF8L2P0C7V8 631 aa7.97□□□□□ -1.13
CPNE8-202ENST00000360449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.93□□□□□ -1.14
CPNE8-202ENST00000360449 HNRNPUL2Q1KMD3 747 aaKnown RBP7.93□□□□□ -1.14
CPNE8-202ENST00000360449 TPRNQ4KMQ1 711 aa7.9□□□□□ -1.14
CPNE8-202ENST00000360449 SAMD1Q6SPF0 538 aaPredicted RBP7.9□□□□□ -1.14
CPNE8-202ENST00000360449 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.87□□□□□ -1.15
CPNE8-202ENST00000360449 VASPP50552 380 aaPredicted RBP7.85□□□□□ -1.15
CPNE8-202ENST00000360449 ERICH6Q7L0X2 663 aa7.82□□□□□ -1.16
CPNE8-202ENST00000360449 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
CPNE8-202ENST00000360449 BBXQ8WY36 941 aaPredicted RBP7.81□□□□□ -1.16
CPNE8-202ENST00000360449 SPDYE4A6NLX3 237 aa7.8□□□□□ -1.16
CPNE8-202ENST00000360449 DAXXQ9UER7 740 aaPredicted RBP7.76□□□□□ -1.17
CPNE8-202ENST00000360449 PKD2Q13563 968 aa7.75□□□□□ -1.17
CPNE8-202ENST00000360449 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
CPNE8-202ENST00000360449 PROM2Q8N271 834 aa7.75□□□□□ -1.17
CPNE8-202ENST00000360449 ARXQ96QS3 562 aa7.75□□□□□ -1.17
CPNE8-202ENST00000360449 KDM2AQ9Y2K7 1162 aa7.75□□□□□ -1.17
CPNE8-202ENST00000360449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPNE8-202ENST00000360449 PAXIP1Q6ZW49 1069 aaPredicted RBP7.72□□□□□ -1.17
CPNE8-202ENST00000360449 ZNF219Q9P2Y4 722 aaPredicted RBP7.71□□□□□ -1.17
CPNE8-202ENST00000360449 APLP2Q06481 763 aa7.71□□□□□ -1.18
CPNE8-202ENST00000360449 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
CPNE8-202ENST00000360449 FBLN2P98095 1184 aa7.69□□□□□ -1.18
CPNE8-202ENST00000360449 NBR1Q14596 966 aa7.67□□□□□ -1.18
CPNE8-202ENST00000360449 SPRYD3Q8NCJ5 442 aa7.66□□□□□ -1.18
CPNE8-202ENST00000360449 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
CPNE8-202ENST00000360449 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
CPNE8-202ENST00000360449 ECM2O94769 699 aaPredicted RBP7.64□□□□□ -1.19
CPNE8-202ENST00000360449 GTF3C3Q9Y5Q9 886 aa7.64□□□□□ -1.19
CPNE8-202ENST00000360449 U3KPZ7 1027 aaPredicted RBP7.62□□□□□ -1.19
CPNE8-202ENST00000360449 SPOCK2Q92563 424 aa7.61□□□□□ -1.19
CPNE8-202ENST00000360449 DCAF8L1A6NGE4 600 aa7.59□□□□□ -1.19
CPNE8-202ENST00000360449 KLHL34Q8N239 644 aa7.59□□□□□ -1.2
CPNE8-202ENST00000360449 NPM1P06748 294 aaKnown RBP eCLIP7.58□□□□□ -1.2
CPNE8-202ENST00000360449 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
CPNE8-202ENST00000360449 HOMEZQ8IX15 550 aa7.55□□□□□ -1.2
CPNE8-202ENST00000360449 MKRN4PQ13434 485 aaPredicted RBP7.54□□□□□ -1.2
CPNE8-202ENST00000360449 DNAJC5Q9H3Z4 198 aa7.54□□□□□ -1.2
CPNE8-202ENST00000360449 TMEM132AQ24JP5 1023 aa7.51□□□□□ -1.21
CPNE8-202ENST00000360449 RGL2O15211 777 aa7.48□□□□□ -1.21
CPNE8-202ENST00000360449 STAG3Q9UJ98 1225 aa7.48□□□□□ -1.21
CPNE8-202ENST00000360449 CHGAP10645 457 aaKnown RBP7.46□□□□□ -1.21
CPNE8-202ENST00000360449 C14orf37Q86TY3 774 aa7.44□□□□□ -1.22
CPNE8-202ENST00000360449 PLCD3Q8N3E9 789 aa7.43□□□□□ -1.22
CPNE8-202ENST00000360449 TRIM41Q8WV44 630 aa7.42□□□□□ -1.22
CPNE8-202ENST00000360449 ZBTB12Q9Y330 459 aaPredicted RBP7.41□□□□□ -1.22
CPNE8-202ENST00000360449 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
CPNE8-202ENST00000360449 ZBTB47Q9UFB7 747 aaPredicted RBP7.38□□□□□ -1.23
CPNE8-202ENST00000360449 PLEKHG5O94827 1062 aa7.36□□□□□ -1.23
CPNE8-202ENST00000360449 CIZ1Q9ULV3 898 aaPredicted RBP7.36□□□□□ -1.23
CPNE8-202ENST00000360449 POLA2Q14181 598 aa7.34□□□□□ -1.23
CPNE8-202ENST00000360449 MIER1Q8N108 512 aa7.33□□□□□ -1.24
CPNE8-202ENST00000360449 TRHP20396 242 aaPredicted RBP7.3□□□□□ -1.24
CPNE8-202ENST00000360449 P3H3Q8IVL6 736 aa7.3□□□□□ -1.24
CPNE8-202ENST00000360449 RANGAP1P46060 587 aaPredicted RBP7.29□□□□□ -1.24
CPNE8-202ENST00000360449 CACNB1Q02641 598 aaPredicted RBP7.28□□□□□ -1.24
CPNE8-202ENST00000360449 RYDENQ9NUL5 291 aaKnown RBP7.28□□□□□ -1.24
CPNE8-202ENST00000360449 ZNF692Q9BU19 519 aaPredicted RBP7.25□□□□□ -1.25
CPNE8-202ENST00000360449 GSE1Q14687 1217 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms