RNA–Protein interactions for RNA: ENST00000622250.4

CNTNAP4-209, Transcript of contactin associated protein like 4, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP4, Length 3,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-209ENST00000622250 NISCHQ9Y2I1 1504 aa13.02□□□□□ -0.33
CNTNAP4-209ENST00000622250 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
CNTNAP4-209ENST00000622250 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
CNTNAP4-209ENST00000622250 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
CNTNAP4-209ENST00000622250 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
CNTNAP4-209ENST00000622250 HRCP23327 699 aa11.29□□□□□ -0.6
CNTNAP4-209ENST00000622250 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
CNTNAP4-209ENST00000622250 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
CNTNAP4-209ENST00000622250 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
CNTNAP4-209ENST00000622250 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
CNTNAP4-209ENST00000622250 FAM9AQ8IZU1 332 aaPredicted RBP11.07□□□□□ -0.64
CNTNAP4-209ENST00000622250 MYO15BQ96JP2 1530 aa11.02□□□□□ -0.65
CNTNAP4-209ENST00000622250 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
CNTNAP4-209ENST00000622250 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.66
CNTNAP4-209ENST00000622250 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
CNTNAP4-209ENST00000622250 ZEB1P37275 1124 aaPredicted RBP10.86□□□□□ -0.67
CNTNAP4-209ENST00000622250 TTBK1Q5TCY1 1321 aaPredicted RBP10.82□□□□□ -0.68
CNTNAP4-209ENST00000622250 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
CNTNAP4-209ENST00000622250 DCAF1Q9Y4B6 1507 aa10.75□□□□□ -0.69
CNTNAP4-209ENST00000622250 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
CNTNAP4-209ENST00000622250 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
CNTNAP4-209ENST00000622250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
CNTNAP4-209ENST00000622250 CENPBP07199 599 aaPredicted RBP10.57□□□□□ -0.72
CNTNAP4-209ENST00000622250 SCAF1Q9H7N4 1312 aaKnown RBP10.54□□□□□ -0.72
CNTNAP4-209ENST00000622250 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
CNTNAP4-209ENST00000622250 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
CNTNAP4-209ENST00000622250 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
CNTNAP4-209ENST00000622250 RANGAP1P46060 587 aaPredicted RBP10.5□□□□□ -0.73
CNTNAP4-209ENST00000622250 RSF1Q96T23 1441 aaPredicted RBP10.49□□□□□ -0.73
CNTNAP4-209ENST00000622250 MYT1Q01538 1121 aa10.48□□□□□ -0.73
CNTNAP4-209ENST00000622250 SCRIBQ14160 1630 aa10.48□□□□□ -0.73
CNTNAP4-209ENST00000622250 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
CNTNAP4-209ENST00000622250 APLP2Q06481 763 aa10.44□□□□□ -0.74
CNTNAP4-209ENST00000622250 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
CNTNAP4-209ENST00000622250 NEUROD1Q13562 356 aa10.41□□□□□ -0.74
CNTNAP4-209ENST00000622250 HNRNPUL2Q1KMD3 747 aaKnown RBP10.41□□□□□ -0.74
CNTNAP4-209ENST00000622250 ABCC9O60706 1549 aa10.39□□□□□ -0.75
CNTNAP4-209ENST00000622250 RB1CC1Q8TDY2 1594 aa10.32□□□□□ -0.76
CNTNAP4-209ENST00000622250 ZNF316A6NFI3 1004 aaPredicted RBP10.3□□□□□ -0.76
CNTNAP4-209ENST00000622250 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
CNTNAP4-209ENST00000622250 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
CNTNAP4-209ENST00000622250 PABPN1Q86U42 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
CNTNAP4-209ENST00000622250 MROH2BQ7Z745 1585 aa10.19□□□□□ -0.78
CNTNAP4-209ENST00000622250 ITGAEP38570 1179 aa10.19□□□□□ -0.78
CNTNAP4-209ENST00000622250 MIER1Q8N108 512 aa10.18□□□□□ -0.78
CNTNAP4-209ENST00000622250 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
CNTNAP4-209ENST00000622250 SOGA1O94964 1423 aa10.12□□□□□ -0.79
CNTNAP4-209ENST00000622250 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
CNTNAP4-209ENST00000622250 WIZO95785 1651 aa10.1□□□□□ -0.79
CNTNAP4-209ENST00000622250 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
CNTNAP4-209ENST00000622250 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
CNTNAP4-209ENST00000622250 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
CNTNAP4-209ENST00000622250 NACADO15069 1562 aa10.06□□□□□ -0.8
CNTNAP4-209ENST00000622250 CLIP1P30622 1438 aa10.02□□□□□ -0.81
CNTNAP4-209ENST00000622250 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
CNTNAP4-209ENST00000622250 BCANQ96GW7 911 aa10.01□□□□□ -0.81
CNTNAP4-209ENST00000622250 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
CNTNAP4-209ENST00000622250 RUSC2Q8N2Y8 1516 aa10□□□□□ -0.81
CNTNAP4-209ENST00000622250 EEA1Q15075 1411 aa9.99□□□□□ -0.81
CNTNAP4-209ENST00000622250 WRNQ14191 1432 aaPredicted RBP eCLIP9.98□□□□□ -0.81
CNTNAP4-209ENST00000622250 NEFLP07196 543 aa9.97□□□□□ -0.81
CNTNAP4-209ENST00000622250 FAM50AQ14320 339 aaKnown RBP9.94□□□□□ -0.82
CNTNAP4-209ENST00000622250 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
CNTNAP4-209ENST00000622250 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
CNTNAP4-209ENST00000622250 DDX10Q13206 875 aaKnown RBP9.89□□□□□ -0.83
CNTNAP4-209ENST00000622250 P3H3Q8IVL6 736 aa9.88□□□□□ -0.83
CNTNAP4-209ENST00000622250 SUPT16HQ9Y5B9 1047 aaKnown RBP9.88□□□□□ -0.83
CNTNAP4-209ENST00000622250 FKBP8Q14318 412 aa9.87□□□□□ -0.83
CNTNAP4-209ENST00000622250 VPS8Q8N3P4 1428 aa9.87□□□□□ -0.83
CNTNAP4-209ENST00000622250 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
CNTNAP4-209ENST00000622250 HIRIP3Q9BW71 556 aaPredicted RBP9.87□□□□□ -0.83
CNTNAP4-209ENST00000622250 BCL11AQ9H165 835 aa9.85□□□□□ -0.83
CNTNAP4-209ENST00000622250 ERICH6Q7L0X2 663 aa9.84□□□□□ -0.83
CNTNAP4-209ENST00000622250 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
CNTNAP4-209ENST00000622250 SMARCA2P51531 1590 aa9.83□□□□□ -0.84
CNTNAP4-209ENST00000622250 TRIM52Q96A61 297 aa9.83□□□□□ -0.84
CNTNAP4-209ENST00000622250 ANP32CO43423 234 aa9.82□□□□□ -0.84
CNTNAP4-209ENST00000622250 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
CNTNAP4-209ENST00000622250 RAPGEF2Q9Y4G8 1499 aa9.81□□□□□ -0.84
CNTNAP4-209ENST00000622250 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
CNTNAP4-209ENST00000622250 CNGB1Q14028 1251 aaPredicted RBP9.79□□□□□ -0.84
CNTNAP4-209ENST00000622250 SIN3AQ96ST3 1273 aa9.79□□□□□ -0.84
CNTNAP4-209ENST00000622250 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
CNTNAP4-209ENST00000622250 BAZ1BQ9UIG0 1483 aaKnown RBP9.77□□□□□ -0.85
CNTNAP4-209ENST00000622250 CCNB3Q8WWL7 1395 aa9.75□□□□□ -0.85
CNTNAP4-209ENST00000622250 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
CNTNAP4-209ENST00000622250 PRKCSHP14314 528 aaPredicted RBP9.74□□□□□ -0.85
CNTNAP4-209ENST00000622250 ANP32EQ9BTT0 268 aa9.72□□□□□ -0.85
CNTNAP4-209ENST00000622250 POLR3GLQ9BT43 218 aa9.71□□□□□ -0.85
CNTNAP4-209ENST00000622250 IRX6P78412 446 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP4-209ENST00000622250 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
CNTNAP4-209ENST00000622250 KIF27Q86VH2 1401 aa9.7□□□□□ -0.86
CNTNAP4-209ENST00000622250 TONSLQ96HA7 1378 aa9.69□□□□□ -0.86
CNTNAP4-209ENST00000622250 RAB3GAP2Q9H2M9 1393 aa9.69□□□□□ -0.86
CNTNAP4-209ENST00000622250 KIF21BO75037 1637 aa9.69□□□□□ -0.86
CNTNAP4-209ENST00000622250 EIF4G1Q04637 1599 aaKnown RBP9.68□□□□□ -0.86
CNTNAP4-209ENST00000622250 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
CNTNAP4-209ENST00000622250 CDK11AQ9UQ88 783 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP4-209ENST00000622250 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
CNTNAP4-209ENST00000622250 ARID3CA6NKF2 412 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms