RNA–Protein interactions for RNA: ENST00000539873.1

SLC13A1-204, Transcript of solute carrier family 13 member 1, humanhuman

TSL 5 BASIC

Gene SLC13A1, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A1-204ENST00000539873 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
SLC13A1-204ENST00000539873 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
SLC13A1-204ENST00000539873 MYT1Q01538 1121 aa14.6□□□□□ -0.07
SLC13A1-204ENST00000539873 TTBK1Q5TCY1 1321 aaPredicted RBP14.16□□□□□ -0.14
SLC13A1-204ENST00000539873 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
SLC13A1-204ENST00000539873 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
SLC13A1-204ENST00000539873 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
SLC13A1-204ENST00000539873 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
SLC13A1-204ENST00000539873 APLP2Q06481 763 aa13.46□□□□□ -0.25
SLC13A1-204ENST00000539873 ABCC9O60706 1549 aa13.29□□□□□ -0.28
SLC13A1-204ENST00000539873 HRCP23327 699 aa13.17□□□□□ -0.3
SLC13A1-204ENST00000539873 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
SLC13A1-204ENST00000539873 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
SLC13A1-204ENST00000539873 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
SLC13A1-204ENST00000539873 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
SLC13A1-204ENST00000539873 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
SLC13A1-204ENST00000539873 NACADO15069 1562 aa12.82□□□□□ -0.36
SLC13A1-204ENST00000539873 ZCCHC6Q5VYS8 1495 aaKnown RBP12.77□□□□□ -0.36
SLC13A1-204ENST00000539873 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
SLC13A1-204ENST00000539873 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
SLC13A1-204ENST00000539873 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
SLC13A1-204ENST00000539873 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
SLC13A1-204ENST00000539873 UNC13AQ9UPW8 1703 aa12.63□□□□□ -0.39
SLC13A1-204ENST00000539873 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
SLC13A1-204ENST00000539873 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
SLC13A1-204ENST00000539873 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
SLC13A1-204ENST00000539873 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
SLC13A1-204ENST00000539873 ACIN1Q9UKV3 1341 aaKnown RBP12.41□□□□□ -0.42
SLC13A1-204ENST00000539873 ANP32EQ9BTT0 268 aa12.41□□□□□ -0.42
SLC13A1-204ENST00000539873 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
SLC13A1-204ENST00000539873 UBE2Q2Q8WVN8 375 aa12.32□□□□□ -0.44
SLC13A1-204ENST00000539873 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
SLC13A1-204ENST00000539873 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
SLC13A1-204ENST00000539873 NEUROD1Q13562 356 aa12.21□□□□□ -0.46
SLC13A1-204ENST00000539873 PLEKHG5O94827 1062 aa12.2□□□□□ -0.46
SLC13A1-204ENST00000539873 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
SLC13A1-204ENST00000539873 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
SLC13A1-204ENST00000539873 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
SLC13A1-204ENST00000539873 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
SLC13A1-204ENST00000539873 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
SLC13A1-204ENST00000539873 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
SLC13A1-204ENST00000539873 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
SLC13A1-204ENST00000539873 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
SLC13A1-204ENST00000539873 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
SLC13A1-204ENST00000539873 PKNOX2Q96KN3 472 aa12.01□□□□□ -0.49
SLC13A1-204ENST00000539873 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
SLC13A1-204ENST00000539873 SMARCA4P51532 1647 aa11.91□□□□□ -0.5
SLC13A1-204ENST00000539873 ARXQ96QS3 562 aa11.91□□□□□ -0.5
SLC13A1-204ENST00000539873 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.51
SLC13A1-204ENST00000539873 RANGAP1P46060 587 aaPredicted RBP11.88□□□□□ -0.51
SLC13A1-204ENST00000539873 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
SLC13A1-204ENST00000539873 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
SLC13A1-204ENST00000539873 MYT1LQ9UL68 1186 aa11.81□□□□□ -0.52
SLC13A1-204ENST00000539873 PEG3Q9GZU2 1588 aa11.81□□□□□ -0.52
SLC13A1-204ENST00000539873 NCAPD3P42695 1498 aa11.8□□□□□ -0.52
SLC13A1-204ENST00000539873 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
SLC13A1-204ENST00000539873 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
SLC13A1-204ENST00000539873 NEFLP07196 543 aa11.79□□□□□ -0.52
SLC13A1-204ENST00000539873 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
SLC13A1-204ENST00000539873 HMGXB3Q12766 1538 aa11.77□□□□□ -0.53
SLC13A1-204ENST00000539873 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
SLC13A1-204ENST00000539873 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
SLC13A1-204ENST00000539873 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
SLC13A1-204ENST00000539873 PDIA4P13667 645 aaKnown RBP11.7□□□□□ -0.54
SLC13A1-204ENST00000539873 WIZO95785 1651 aa11.7□□□□□ -0.54
SLC13A1-204ENST00000539873 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
SLC13A1-204ENST00000539873 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
SLC13A1-204ENST00000539873 PDE4CQ08493 712 aa11.66□□□□□ -0.54
SLC13A1-204ENST00000539873 RSF1Q96T23 1441 aaPredicted RBP11.64□□□□□ -0.55
SLC13A1-204ENST00000539873 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
SLC13A1-204ENST00000539873 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
SLC13A1-204ENST00000539873 TIMELESSQ9UNS1 1208 aa11.57□□□□□ -0.56
SLC13A1-204ENST00000539873 FGD1P98174 961 aa11.55□□□□□ -0.56
SLC13A1-204ENST00000539873 NESP48681 1621 aa11.51□□□□□ -0.57
SLC13A1-204ENST00000539873 DIEXFQ68CQ4 756 aaKnown RBP11.51□□□□□ -0.57
SLC13A1-204ENST00000539873 LAMC3Q9Y6N6 1575 aa11.51□□□□□ -0.57
SLC13A1-204ENST00000539873 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
SLC13A1-204ENST00000539873 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
SLC13A1-204ENST00000539873 GLIPR1L2Q4G1C9 344 aa11.48□□□□□ -0.57
SLC13A1-204ENST00000539873 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
SLC13A1-204ENST00000539873 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
SLC13A1-204ENST00000539873 PLPPR3Q6T4P5 718 aa11.45□□□□□ -0.58
SLC13A1-204ENST00000539873 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.45□□□□□ -0.58
SLC13A1-204ENST00000539873 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
SLC13A1-204ENST00000539873 HOMEZQ8IX15 550 aa11.44□□□□□ -0.58
SLC13A1-204ENST00000539873 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
SLC13A1-204ENST00000539873 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
SLC13A1-204ENST00000539873 AAMPQ13685 434 aa11.42□□□□□ -0.58
SLC13A1-204ENST00000539873 BCL11BQ9C0K0 894 aaPredicted RBP11.42□□□□□ -0.58
SLC13A1-204ENST00000539873 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
SLC13A1-204ENST00000539873 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
SLC13A1-204ENST00000539873 CCDC88BA6NC98 1476 aa11.4□□□□□ -0.58
SLC13A1-204ENST00000539873 ZMYND15Q9H091 742 aa11.39□□□□□ -0.59
SLC13A1-204ENST00000539873 CFTRP13569 1480 aa11.38□□□□□ -0.59
SLC13A1-204ENST00000539873 PDS5BQ9NTI5 1447 aa11.38□□□□□ -0.59
SLC13A1-204ENST00000539873 AEBP2Q6ZN18 517 aaPredicted RBP11.37□□□□□ -0.59
SLC13A1-204ENST00000539873 CUX2O14529 1486 aa11.36□□□□□ -0.59
SLC13A1-204ENST00000539873 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
SLC13A1-204ENST00000539873 A0A0U1RQG5 324 aaPredicted RBP11.32□□□□□ -0.6
SLC13A1-204ENST00000539873 RBM10P98175 930 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms