RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 DCAF8L2P0C7V8 631 aa12.38□□□□□ -0.43
DDX60-201ENST00000393743 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
DDX60-201ENST00000393743 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
DDX60-201ENST00000393743 FAM9AQ8IZU1 332 aaPredicted RBP11.55□□□□□ -0.56
DDX60-201ENST00000393743 APLP2Q06481 763 aa11.4□□□□□ -0.58
DDX60-201ENST00000393743 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
DDX60-201ENST00000393743 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
DDX60-201ENST00000393743 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
DDX60-201ENST00000393743 ZEB1P37275 1124 aaPredicted RBP10.89□□□□□ -0.67
DDX60-201ENST00000393743 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
DDX60-201ENST00000393743 CCER1Q8TC90 406 aaPredicted RBP10.85□□□□□ -0.67
DDX60-201ENST00000393743 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
DDX60-201ENST00000393743 UBTFP17480 764 aaKnown RBP10.79□□□□□ -0.68
DDX60-201ENST00000393743 CENPBP07199 599 aaPredicted RBP10.76□□□□□ -0.69
DDX60-201ENST00000393743 RANGAP1P46060 587 aaPredicted RBP10.71□□□□□ -0.7
DDX60-201ENST00000393743 PCGF6Q9BYE7 350 aa10.7□□□□□ -0.7
DDX60-201ENST00000393743 ERICH6Q7L0X2 663 aa10.67□□□□□ -0.7
DDX60-201ENST00000393743 TTBK1Q5TCY1 1321 aaPredicted RBP10.67□□□□□ -0.7
DDX60-201ENST00000393743 NEFLP07196 543 aa10.63□□□□□ -0.71
DDX60-201ENST00000393743 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
DDX60-201ENST00000393743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.54□□□□□ -0.72
DDX60-201ENST00000393743 HNRNPUL2Q1KMD3 747 aaKnown RBP10.54□□□□□ -0.72
DDX60-201ENST00000393743 TRIM26Q12899 539 aaPredicted RBP10.41□□□□□ -0.74
DDX60-201ENST00000393743 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
DDX60-201ENST00000393743 MYT1Q01538 1121 aa10.32□□□□□ -0.76
DDX60-201ENST00000393743 ITGAEP38570 1179 aa10.3□□□□□ -0.76
DDX60-201ENST00000393743 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
DDX60-201ENST00000393743 CCDC180Q9P1Z9 1646 aa10.27□□□□□ -0.77
DDX60-201ENST00000393743 ABCC9O60706 1549 aa10.26□□□□□ -0.77
DDX60-201ENST00000393743 YTHDC1Q96MU7 727 aaKnown RBP10.22□□□□□ -0.77
DDX60-201ENST00000393743 SLC4A1APQ9BWU0 796 aaKnown RBP10.21□□□□□ -0.77
DDX60-201ENST00000393743 CHIC1Q5VXU3 224 aa10.21□□□□□ -0.78
DDX60-201ENST00000393743 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX60-201ENST00000393743 PPARGC1BQ86YN6 1023 aaKnown RBP10.17□□□□□ -0.78
DDX60-201ENST00000393743 FAM50AQ14320 339 aaKnown RBP10.16□□□□□ -0.78
DDX60-201ENST00000393743 ZCCHC6Q5VYS8 1495 aaKnown RBP10.16□□□□□ -0.78
DDX60-201ENST00000393743 TRIM52Q96A61 297 aa10.16□□□□□ -0.78
DDX60-201ENST00000393743 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
DDX60-201ENST00000393743 HRCP23327 699 aa10.11□□□□□ -0.79
DDX60-201ENST00000393743 FBLN2P98095 1184 aa10.1□□□□□ -0.79
DDX60-201ENST00000393743 NEFMP07197 916 aa10.1□□□□□ -0.79
DDX60-201ENST00000393743 ZBTB47Q9UFB7 747 aaPredicted RBP10.1□□□□□ -0.79
DDX60-201ENST00000393743 CLSPNQ9HAW4 1339 aa10.09□□□□□ -0.79
DDX60-201ENST00000393743 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
DDX60-201ENST00000393743 ESF1Q9H501 851 aaKnown RBP10.05□□□□□ -0.8
DDX60-201ENST00000393743 LOC105371045A0A1W2PR82 267 aa10.05□□□□□ -0.8
DDX60-201ENST00000393743 NPM1P06748 294 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDX60-201ENST00000393743 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
DDX60-201ENST00000393743 ANP32CO43423 234 aa9.99□□□□□ -0.81
DDX60-201ENST00000393743 BCANQ96GW7 911 aa9.99□□□□□ -0.81
DDX60-201ENST00000393743 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
DDX60-201ENST00000393743 CSRNP3Q8WYN3 585 aa9.98□□□□□ -0.81
DDX60-201ENST00000393743 DCAF1Q9Y4B6 1507 aa9.95□□□□□ -0.82
DDX60-201ENST00000393743 NEUROD1Q13562 356 aa9.95□□□□□ -0.82
DDX60-201ENST00000393743 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
DDX60-201ENST00000393743 ZNF326Q5BKZ1 582 aaKnown RBP9.94□□□□□ -0.82
DDX60-201ENST00000393743 ACIN1Q9UKV3 1341 aaKnown RBP9.92□□□□□ -0.82
DDX60-201ENST00000393743 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
DDX60-201ENST00000393743 STAG3Q9UJ98 1225 aa9.9□□□□□ -0.83
DDX60-201ENST00000393743 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
DDX60-201ENST00000393743 SLC24A1O60721 1099 aa9.86□□□□□ -0.83
DDX60-201ENST00000393743 SCRIBQ14160 1630 aa9.86□□□□□ -0.83
DDX60-201ENST00000393743 P3H3Q8IVL6 736 aa9.82□□□□□ -0.84
DDX60-201ENST00000393743 TSPY4P0CV99 314 aa9.81□□□□□ -0.84
DDX60-201ENST00000393743 TSPY10P0CW01 314 aa9.81□□□□□ -0.84
DDX60-201ENST00000393743 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
DDX60-201ENST00000393743 NACADO15069 1562 aa9.78□□□□□ -0.84
DDX60-201ENST00000393743 CHGAP10645 457 aaKnown RBP9.77□□□□□ -0.84
DDX60-201ENST00000393743 CHMP7Q8WUX9 453 aaPredicted RBP9.77□□□□□ -0.85
DDX60-201ENST00000393743 RB1CC1Q8TDY2 1594 aa9.76□□□□□ -0.85
DDX60-201ENST00000393743 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
DDX60-201ENST00000393743 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
DDX60-201ENST00000393743 EEA1Q15075 1411 aa9.72□□□□□ -0.85
DDX60-201ENST00000393743 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.72□□□□□ -0.85
DDX60-201ENST00000393743 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.85
DDX60-201ENST00000393743 MTUS2Q5JR59 1369 aa9.71□□□□□ -0.85
DDX60-201ENST00000393743 UPF2Q9HAU5 1272 aaKnown RBP9.71□□□□□ -0.85
DDX60-201ENST00000393743 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
DDX60-201ENST00000393743 NPM2Q86SE8 214 aaKnown RBP9.69□□□□□ -0.86
DDX60-201ENST00000393743 ANP32BQ92688 251 aaKnown RBP9.68□□□□□ -0.86
DDX60-201ENST00000393743 PLEKHD1A6NEE1 506 aa9.67□□□□□ -0.86
DDX60-201ENST00000393743 WDR43Q15061 677 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDX60-201ENST00000393743 CDCA8Q53HL2 280 aa9.64□□□□□ -0.87
DDX60-201ENST00000393743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.64□□□□□ -0.87
DDX60-201ENST00000393743 PPP1R15AO75807 674 aaPredicted RBP9.63□□□□□ -0.87
DDX60-201ENST00000393743 HSP90AA1P07900 732 aaKnown RBP9.63□□□□□ -0.87
DDX60-201ENST00000393743 EIF5BO60841 1220 aaKnown RBP9.62□□□□□ -0.87
DDX60-201ENST00000393743 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
DDX60-201ENST00000393743 MYH16Q9H6N6 1097 aa9.6□□□□□ -0.87
DDX60-201ENST00000393743 PLPPR3Q6T4P5 718 aa9.59□□□□□ -0.87
DDX60-201ENST00000393743 BCL11AQ9H165 835 aa9.59□□□□□ -0.88
DDX60-201ENST00000393743 CLIP1P30622 1438 aa9.58□□□□□ -0.88
DDX60-201ENST00000393743 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
DDX60-201ENST00000393743 BAZ1BQ9UIG0 1483 aaKnown RBP9.57□□□□□ -0.88
DDX60-201ENST00000393743 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
DDX60-201ENST00000393743 CFAP53Q96M91 514 aa9.57□□□□□ -0.88
DDX60-201ENST00000393743 C14orf37Q86TY3 774 aa9.56□□□□□ -0.88
DDX60-201ENST00000393743 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
DDX60-201ENST00000393743 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
DDX60-201ENST00000393743 HDGFP51858 240 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms