RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
SOX6-208ENST00000527619 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
SOX6-208ENST00000527619 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
SOX6-208ENST00000527619 MYT1Q01538 1121 aa13.18□□□□□ -0.3
SOX6-208ENST00000527619 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
SOX6-208ENST00000527619 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
SOX6-208ENST00000527619 HRCP23327 699 aa12.6□□□□□ -0.39
SOX6-208ENST00000527619 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
SOX6-208ENST00000527619 CHIC1Q5VXU3 224 aa12.46□□□□□ -0.41
SOX6-208ENST00000527619 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
SOX6-208ENST00000527619 ERICH6Q7L0X2 663 aa12.25□□□□□ -0.45
SOX6-208ENST00000527619 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
SOX6-208ENST00000527619 APLP2Q06481 763 aa12.2□□□□□ -0.46
SOX6-208ENST00000527619 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
SOX6-208ENST00000527619 PCGF6Q9BYE7 350 aa12.17□□□□□ -0.46
SOX6-208ENST00000527619 CCDC180Q9P1Z9 1646 aa12.07□□□□□ -0.48
SOX6-208ENST00000527619 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
SOX6-208ENST00000527619 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
SOX6-208ENST00000527619 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
SOX6-208ENST00000527619 BCL11AQ9H165 835 aa11.99□□□□□ -0.49
SOX6-208ENST00000527619 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
SOX6-208ENST00000527619 DCAF1Q9Y4B6 1507 aa11.95□□□□□ -0.5
SOX6-208ENST00000527619 SHROOM4Q9ULL8 1493 aa11.94□□□□□ -0.5
SOX6-208ENST00000527619 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
SOX6-208ENST00000527619 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
SOX6-208ENST00000527619 ABCC9O60706 1549 aa11.81□□□□□ -0.52
SOX6-208ENST00000527619 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
SOX6-208ENST00000527619 FAM9AQ8IZU1 332 aaPredicted RBP11.81□□□□□ -0.52
SOX6-208ENST00000527619 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
SOX6-208ENST00000527619 KCNA4P22459 653 aa11.72□□□□□ -0.53
SOX6-208ENST00000527619 ACIN1Q9UKV3 1341 aaKnown RBP11.67□□□□□ -0.54
SOX6-208ENST00000527619 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
SOX6-208ENST00000527619 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
SOX6-208ENST00000527619 NEUROD1Q13562 356 aa11.59□□□□□ -0.55
SOX6-208ENST00000527619 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
SOX6-208ENST00000527619 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
SOX6-208ENST00000527619 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
SOX6-208ENST00000527619 DCAF8L2P0C7V8 631 aa11.54□□□□□ -0.56
SOX6-208ENST00000527619 AMER1Q5JTC6 1135 aaPredicted RBP11.53□□□□□ -0.56
SOX6-208ENST00000527619 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
SOX6-208ENST00000527619 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
SOX6-208ENST00000527619 PHF23Q9BUL5 403 aaPredicted RBP11.51□□□□□ -0.57
SOX6-208ENST00000527619 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
SOX6-208ENST00000527619 NACADO15069 1562 aa11.36□□□□□ -0.59
SOX6-208ENST00000527619 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
SOX6-208ENST00000527619 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
SOX6-208ENST00000527619 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
SOX6-208ENST00000527619 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
SOX6-208ENST00000527619 ARXQ96QS3 562 aa11.23□□□□□ -0.61
SOX6-208ENST00000527619 CCER1Q8TC90 406 aaPredicted RBP11.22□□□□□ -0.61
SOX6-208ENST00000527619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.21□□□□□ -0.62
SOX6-208ENST00000527619 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
SOX6-208ENST00000527619 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
SOX6-208ENST00000527619 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
SOX6-208ENST00000527619 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
SOX6-208ENST00000527619 YTHDC1Q96MU7 727 aaKnown RBP11.12□□□□□ -0.63
SOX6-208ENST00000527619 ZNF316A6NFI3 1004 aaPredicted RBP11.11□□□□□ -0.63
SOX6-208ENST00000527619 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
SOX6-208ENST00000527619 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
SOX6-208ENST00000527619 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
SOX6-208ENST00000527619 SCRIBQ14160 1630 aa11.07□□□□□ -0.64
SOX6-208ENST00000527619 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
SOX6-208ENST00000527619 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
SOX6-208ENST00000527619 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
SOX6-208ENST00000527619 MIER1Q8N108 512 aa11.01□□□□□ -0.65
SOX6-208ENST00000527619 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
SOX6-208ENST00000527619 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
SOX6-208ENST00000527619 RANGAP1P46060 587 aaPredicted RBP10.97□□□□□ -0.65
SOX6-208ENST00000527619 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
SOX6-208ENST00000527619 PKNOX2Q96KN3 472 aa10.95□□□□□ -0.66
SOX6-208ENST00000527619 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
SOX6-208ENST00000527619 RSF1Q96T23 1441 aaPredicted RBP10.88□□□□□ -0.67
SOX6-208ENST00000527619 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
SOX6-208ENST00000527619 BCANQ96GW7 911 aa10.86□□□□□ -0.67
SOX6-208ENST00000527619 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
SOX6-208ENST00000527619 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
SOX6-208ENST00000527619 PLCB2Q00722 1185 aa10.77□□□□□ -0.69
SOX6-208ENST00000527619 DNAJC5BQ9UF47 199 aa10.77□□□□□ -0.69
SOX6-208ENST00000527619 HAP1P54257 671 aaPredicted RBP10.75□□□□□ -0.69
SOX6-208ENST00000527619 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
SOX6-208ENST00000527619 PDIA4P13667 645 aaKnown RBP10.73□□□□□ -0.69
SOX6-208ENST00000527619 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
SOX6-208ENST00000527619 NEFLP07196 543 aa10.72□□□□□ -0.69
SOX6-208ENST00000527619 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
SOX6-208ENST00000527619 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.69
SOX6-208ENST00000527619 ZBTB22O15209 634 aa10.7□□□□□ -0.7
SOX6-208ENST00000527619 RBM19Q9Y4C8 960 aaKnown RBP10.7□□□□□ -0.7
SOX6-208ENST00000527619 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
SOX6-208ENST00000527619 PDE4CQ08493 712 aa10.66□□□□□ -0.7
SOX6-208ENST00000527619 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.7
SOX6-208ENST00000527619 CC2D2AQ9P2K1 1620 aa10.65□□□□□ -0.71
SOX6-208ENST00000527619 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
SOX6-208ENST00000527619 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
SOX6-208ENST00000527619 FKBP8Q14318 412 aa10.62□□□□□ -0.71
SOX6-208ENST00000527619 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
SOX6-208ENST00000527619 MSH5O43196 834 aa10.61□□□□□ -0.71
SOX6-208ENST00000527619 BAZ1AQ9NRL2 1556 aaPredicted RBP10.6□□□□□ -0.71
SOX6-208ENST00000527619 C14orf37Q86TY3 774 aa10.59□□□□□ -0.71
SOX6-208ENST00000527619 SMARCA4P51532 1647 aa10.58□□□□□ -0.72
SOX6-208ENST00000527619 ADRA2BP18089 450 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms