RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 CHIC1Q5VXU3 224 aa11.29□□□□□ -0.6
LINC01197-202ENST00000555332 AEBP2Q6ZN18 517 aaPredicted RBP11.14□□□□□ -0.63
LINC01197-202ENST00000555332 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
LINC01197-202ENST00000555332 EHMT2Q96KQ7 1210 aa10.21□□□□□ -0.77
LINC01197-202ENST00000555332 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.78
LINC01197-202ENST00000555332 PLPPR3Q6T4P5 718 aa9.72□□□□□ -0.85
LINC01197-202ENST00000555332 KCNA4P22459 653 aa9.59□□□□□ -0.87
LINC01197-202ENST00000555332 RTN4Q9NQC3 1192 aaKnown RBP9.59□□□□□ -0.87
LINC01197-202ENST00000555332 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
LINC01197-202ENST00000555332 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
LINC01197-202ENST00000555332 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
LINC01197-202ENST00000555332 SLC4A1APQ9BWU0 796 aaKnown RBP9.22□□□□□ -0.93
LINC01197-202ENST00000555332 NCBP3Q53F19 620 aaKnown RBP9.18□□□□□ -0.94
LINC01197-202ENST00000555332 ADRA2BP18089 450 aa9.12□□□□□ -0.95
LINC01197-202ENST00000555332 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.96
LINC01197-202ENST00000555332 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
LINC01197-202ENST00000555332 NISCHQ9Y2I1 1504 aa8.91□□□□□ -0.98
LINC01197-202ENST00000555332 ZBTB22O15209 634 aa8.89□□□□□ -0.99
LINC01197-202ENST00000555332 TAOK2Q9UL54 1235 aa8.77□□□□□ -1.01
LINC01197-202ENST00000555332 TIMELESSQ9UNS1 1208 aa8.71□□□□□ -1.01
LINC01197-202ENST00000555332 BCANQ96GW7 911 aa8.7□□□□□ -1.02
LINC01197-202ENST00000555332 PPP6R1Q9UPN7 881 aa8.69□□□□□ -1.02
LINC01197-202ENST00000555332 FOXD1Q16676 465 aa8.68□□□□□ -1.02
LINC01197-202ENST00000555332 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
LINC01197-202ENST00000555332 ARXQ96QS3 562 aa8.65□□□□□ -1.02
LINC01197-202ENST00000555332 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
LINC01197-202ENST00000555332 NPM3O75607 178 aaKnown RBP8.62□□□□□ -1.03
LINC01197-202ENST00000555332 TULP1O00294 542 aaPredicted RBP8.61□□□□□ -1.03
LINC01197-202ENST00000555332 PPP4R3CPQ6ZMV5 832 aa8.6□□□□□ -1.03
LINC01197-202ENST00000555332 HAP1P54257 671 aaPredicted RBP8.6□□□□□ -1.03
LINC01197-202ENST00000555332 FKBP8Q14318 412 aa8.58□□□□□ -1.04
LINC01197-202ENST00000555332 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
LINC01197-202ENST00000555332 FOXD4L1Q9NU39 408 aa8.42□□□□□ -1.06
LINC01197-202ENST00000555332 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
LINC01197-202ENST00000555332 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
LINC01197-202ENST00000555332 VSIG10Q8N0Z9 540 aa8.36□□□□□ -1.07
LINC01197-202ENST00000555332 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
LINC01197-202ENST00000555332 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
LINC01197-202ENST00000555332 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
LINC01197-202ENST00000555332 FBLN2P98095 1184 aa8.26□□□□□ -1.09
LINC01197-202ENST00000555332 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
LINC01197-202ENST00000555332 TMEM132AQ24JP5 1023 aa8.21□□□□□ -1.1
LINC01197-202ENST00000555332 ERICH6Q7L0X2 663 aa8.17□□□□□ -1.1
LINC01197-202ENST00000555332 C14orf37Q86TY3 774 aa8.16□□□□□ -1.1
LINC01197-202ENST00000555332 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
LINC01197-202ENST00000555332 CNKSR2Q8WXI2 1034 aa8.08□□□□□ -1.12
LINC01197-202ENST00000555332 APLP2Q06481 763 aa8.07□□□□□ -1.12
LINC01197-202ENST00000555332 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
LINC01197-202ENST00000555332 PAXIP1Q6ZW49 1069 aaPredicted RBP8.03□□□□□ -1.12
LINC01197-202ENST00000555332 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.12
LINC01197-202ENST00000555332 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
LINC01197-202ENST00000555332 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
LINC01197-202ENST00000555332 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.97□□□□□ -1.13
LINC01197-202ENST00000555332 MSH5O43196 834 aa7.97□□□□□ -1.13
LINC01197-202ENST00000555332 NBR1Q14596 966 aa7.97□□□□□ -1.13
LINC01197-202ENST00000555332 TSHZ2Q9NRE2 1034 aa7.97□□□□□ -1.13
LINC01197-202ENST00000555332 PKD2Q13563 968 aa7.95□□□□□ -1.14
LINC01197-202ENST00000555332 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
LINC01197-202ENST00000555332 DNAJC5BQ9UF47 199 aa7.94□□□□□ -1.14
LINC01197-202ENST00000555332 ATXN8OSP0DMR3 200 aa7.93□□□□□ -1.14
LINC01197-202ENST00000555332 PIAS4Q8N2W9 510 aaPredicted RBP7.93□□□□□ -1.14
LINC01197-202ENST00000555332 NPM1P06748 294 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC01197-202ENST00000555332 BBXQ8WY36 941 aaPredicted RBP7.92□□□□□ -1.14
LINC01197-202ENST00000555332 SHROOM4Q9ULL8 1493 aa7.92□□□□□ -1.14
LINC01197-202ENST00000555332 PELP1Q8IZL8 1130 aaKnown RBP7.92□□□□□ -1.14
LINC01197-202ENST00000555332 UBTFP17480 764 aaKnown RBP7.91□□□□□ -1.14
LINC01197-202ENST00000555332 UNC13AQ9UPW8 1703 aa7.91□□□□□ -1.14
LINC01197-202ENST00000555332 SLC4A2P04920 1241 aa7.88□□□□□ -1.15
LINC01197-202ENST00000555332 IFNLR1Q8IU57 520 aaPredicted RBP7.85□□□□□ -1.15
LINC01197-202ENST00000555332 HRCP23327 699 aa7.85□□□□□ -1.15
LINC01197-202ENST00000555332 FBXO3Q9UK99 471 aa7.84□□□□□ -1.15
LINC01197-202ENST00000555332 DCAF1Q9Y4B6 1507 aa7.84□□□□□ -1.15
LINC01197-202ENST00000555332 TTBK1Q5TCY1 1321 aaPredicted RBP7.83□□□□□ -1.16
LINC01197-202ENST00000555332 VASPP50552 380 aaPredicted RBP7.82□□□□□ -1.16
LINC01197-202ENST00000555332 SPRYD3Q8NCJ5 442 aa7.81□□□□□ -1.16
LINC01197-202ENST00000555332 NACADO15069 1562 aa7.8□□□□□ -1.16
LINC01197-202ENST00000555332 MYCNP04198 464 aaPredicted RBP7.8□□□□□ -1.16
LINC01197-202ENST00000555332 MYT1Q01538 1121 aa7.75□□□□□ -1.17
LINC01197-202ENST00000555332 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
LINC01197-202ENST00000555332 RB1CC1Q8TDY2 1594 aa7.74□□□□□ -1.17
LINC01197-202ENST00000555332 SCAF1Q9H7N4 1312 aaKnown RBP7.74□□□□□ -1.17
LINC01197-202ENST00000555332 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
LINC01197-202ENST00000555332 ECM2O94769 699 aaPredicted RBP7.69□□□□□ -1.18
LINC01197-202ENST00000555332 RNF216Q9NWF9 866 aaPredicted RBP7.68□□□□□ -1.18
LINC01197-202ENST00000555332 MAPK8IP2Q13387 824 aaPredicted RBP7.66□□□□□ -1.18
LINC01197-202ENST00000555332 TRHP20396 242 aaPredicted RBP7.66□□□□□ -1.18
LINC01197-202ENST00000555332 BICRAQ9NZM4 1560 aa7.66□□□□□ -1.18
LINC01197-202ENST00000555332 RGL2O15211 777 aa7.65□□□□□ -1.18
LINC01197-202ENST00000555332 LOC105371045A0A1W2PR82 267 aa7.64□□□□□ -1.19
LINC01197-202ENST00000555332 BRPF1P55201 1214 aaPredicted RBP7.64□□□□□ -1.19
LINC01197-202ENST00000555332 EIF5BO60841 1220 aaKnown RBP7.62□□□□□ -1.19
LINC01197-202ENST00000555332 SPDYE4A6NLX3 237 aa7.6□□□□□ -1.19
LINC01197-202ENST00000555332 ARID3AQ99856 593 aa7.6□□□□□ -1.19
LINC01197-202ENST00000555332 CHGAP10645 457 aaKnown RBP7.59□□□□□ -1.2
LINC01197-202ENST00000555332 PROM2Q8N271 834 aa7.55□□□□□ -1.2
LINC01197-202ENST00000555332 DMRT2Q9Y5R5 561 aa7.54□□□□□ -1.2
LINC01197-202ENST00000555332 CCDC9Q9Y3X0 531 aaKnown RBP7.54□□□□□ -1.2
LINC01197-202ENST00000555332 NEUROD2Q15784 382 aa7.51□□□□□ -1.21
LINC01197-202ENST00000555332 ZCCHC6Q5VYS8 1495 aaKnown RBP7.5□□□□□ -1.21
LINC01197-202ENST00000555332 ABCC9O60706 1549 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms