Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 AL121832.2-201ENST00000610979 668 ntBASIC17.03■□□□□ 0.32
COPS3Q9UNS2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COPS3Q9UNS2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AC020916.1-201ENST00000587762 1774 ntBASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AL512353.2-201ENST00000448759 1962 ntBASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 GUSBP6-202ENST00000438529 1198 ntBASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AL137784.2-201ENST00000607332 1000 ntBASIC17.02■□□□□ 0.32
COPS3Q9UNS2 AL121906.2-201ENST00000621597 723 ntBASIC17.02■□□□□ 0.32
COPS3Q9UNS2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
COPS3Q9UNS2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COPS3Q9UNS2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 Z98044.1-201ENST00000632503 1764 ntBASIC17.01■□□□□ 0.31
COPS3Q9UNS2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.01■□□□□ 0.31
COPS3Q9UNS2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COPS3Q9UNS2 UBQLN4P1-201ENST00000461599 1801 ntBASIC17■□□□□ 0.31
COPS3Q9UNS2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COPS3Q9UNS2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17■□□□□ 0.31
COPS3Q9UNS2 SLC29A4P2-201ENST00000504749 1089 ntBASIC17■□□□□ 0.31
COPS3Q9UNS2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
COPS3Q9UNS2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17■□□□□ 0.31
COPS3Q9UNS2 PNN-205ENST00000556530 601 ntTSL 2 BASIC17■□□□□ 0.31
COPS3Q9UNS2 AC092368.3-202ENST00000574180 1591 ntBASIC17■□□□□ 0.31
COPS3Q9UNS2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms