Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC007322.4-201ENST00000509611 723 ntBASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.18■□□□□ 0.5
CCM2LQ9NUG4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 AL512625.2-201ENST00000417533 625 ntBASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCM2LQ9NUG4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 ZNF815P-204ENST00000434898 1737 ntBASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 AL162412.1-201ENST00000567129 965 ntBASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.16■□□□□ 0.5
CCM2LQ9NUG4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 MYC-209ENST00000641252 345 ntBASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCM2LQ9NUG4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms