Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 AC093503.3-201ENST00000624917 2352 ntBASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB16Q9NRJ7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB16Q9NRJ7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 MIR663A-201ENST00000385250 93 ntBASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB16Q9NRJ7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB16Q9NRJ7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 AC011270.2-201ENST00000624293 2550 ntBASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHB16Q9NRJ7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms